RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 RFX2P48378 723 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 RFX3P48380 749 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 MAXP61244 160 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 WDR5P61964 334 aaKnown RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SHHQ15465 462 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SSX2Q16385 188 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 TMEM69Q5SWH9 247 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ZNF782Q6ZMW2 699 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 NCCRP1Q6ZVX7 275 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 KCTD8Q6ZWB6 473 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CREB3L2Q70SY1 520 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 GRASPQ7Z6J2 395 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CIR1Q86X95 450 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CCDC116Q8IYX3 515 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 MMP21Q8N119 569 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 GJC3Q8NFK1 279 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 OR7G3Q8NG95 312 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 OR56B4Q8NH76 319 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 PHOSPHO1Q8TCT1 267 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 INTS14Q96SY0 518 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 BARD1Q99728 777 aaKnown RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 IL25Q9H293 177 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 APMAPQ9HDC9 416 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 NBASA2RRP1 2371 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 A0A1B0GX78 115 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 FAM170BA6NMN3 283 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 A8MVM7 634 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 NPIPB8E9PQR5 432 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 AGRPO00253 132 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 HCRTR2O43614 444 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SSR4P51571 173 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 BLOC1S1P78537 153 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 PCDH1Q08174 1060 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CHRFAM7AQ494W8 412 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 NDUFAF5Q5TEU4 345 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 GRINAQ7Z429 371 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 TECPR1Q7Z6L1 1165 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 RETREG3Q86VR2 466 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 LAS2Q8IYD9 372 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 MCHR1Q99705 422 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ZBP1Q9H171 429 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 BCL2L10Q9HD36 194 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 STEAP1Q9UHE8 339 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 HES2Q9Y543 173 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ARL5AQ9Y689 179 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 TMEM221A6NGB7 291 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 FIGNL2A6NMB9 653 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 A8MXE2 369 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SLC43A1O75387 559 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 UGT2B7P16662 529 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 KITLGP21583 273 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 GGT2P36268 569 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 MDH2P40926 338 aaKnown RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 MARCKSL1P49006 195 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ATP1B3P54709 279 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 DMWDQ09019 674 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SNTB1Q13884 538 aaKnown RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 OGFRL1Q5TC84 451 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SLC2A7Q6PXP3 512 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 TRILQ7L0X0 811 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SGPP2Q8IWX5 399 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 COMMD1Q8N668 190 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 OR52N1Q8NH53 320 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 EDARADDQ8WWZ3 215 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 MMABQ96EY8 250 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 LRR1Q96L50 414 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 UTP23Q9BRU9 249 aaKnown RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 APOOQ9BUR5 198 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 RTL8AQ9BWD3 113 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 RSPH9Q9H1X1 276 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SEMA4GQ9NTN9 838 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 GAR1Q9NY12 217 aaKnown RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CHRNA9Q9UGM1 479 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ZDHHC2Q9UIJ5 367 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 MALRD1Q5VYJ5 2156 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 HHLA1C9JL84 531 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ZNF587BE7ETH6 402 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 GAPDHSO14556 408 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ZNF264O43296 627 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CTNSO60931 367 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SNCGO76070 127 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ACTL6BO94805 426 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ACP5P13686 325 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CCR7P32248 378 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 MAGEA12P43365 314 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CCSMST1Q4G0I0 132 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 PAPD4Q6PIY7 484 aaKnown RBP4.63□□□□□ -1.67
PTPN13-209ENST00000511467 DHRS4L2Q6PKH6 230 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SUSD1Q6UWL2 747 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 SERPINA12Q8IW75 414 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ZNF101Q8IZC7 436 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 IL22RA1Q8N6P7 574 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 KCNG3Q8TAE7 436 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 CD200R1Q8TD46 325 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 TIMD4Q96H15 378 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 UBXN10Q96LJ8 280 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 ZNF597Q96LX8 424 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 RNF32Q9H0A6 362 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 GP6Q9HCN6 339 aa4.63□□□□□ -1.67
PTPN13-209ENST00000511467 WNT16Q9UBV4 365 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms