RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 IL1RAPQ9NPH3 570 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 C12orf4Q9NQ89 552 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 C8orf4Q9NR00 106 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ACOXLQ9NUZ1 547 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC39A1Q9NY26 324 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 MBD2Q9UBB5 411 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 UBQLN2Q9UHD9 624 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC7A8Q9UHI5 535 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 BCAP29Q9UHQ4 241 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TRMT6Q9UJA5 497 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 TFR2Q9UP52 801 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 EIF3LQ9Y262 564 aaKnown RBP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 CPQQ9Y646 472 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 RIMBP3CA6NJZ7 1639 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 RIMBP3BA6NNM3 1639 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 RIMBP3Q9UFD9 1639 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 ATRNO75882 1429 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 USP6P35125 1406 aa3.17□□□□□ -1.9
ECHDC1-217ENST00000488087 MAP2P11137 1827 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PSME4Q14997 1843 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 IGLV4-3A0A075B6K6 122 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 A0A087WXM4 84 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 KLF18A0A0U1RQI7 1052 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 A0A1W2PQ67 120 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ESYT2A0FGR8 921 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ZSCAN5BA6NJL1 495 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SMIM23A6NLE4 172 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM25AB3EWG3 89 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM25CB3EWG5 89 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 FAM25GB3EWG6 89 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 H3BNH8 94 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PDHXO00330 501 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CHEK1O14757 476 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 OGTO15294 1046 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 TM9SF1O15321 606 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ZW10O43264 779 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 BUB1O43683 1085 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 NMT2O60551 498 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT1A9O60656 530 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 IDH1O75874 414 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CDK14O94921 469 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 H6PDO95479 791 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CXCL14O95715 111 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 TTC4O95801 387 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ANGPTL1O95841 491 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ECDO95905 644 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PAHP00439 452 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 EPOP01588 193 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT2B4P06133 528 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 TRAPPC2P0DI81 140 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 TRAPPC2BP0DI82 140 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CCDC130P13994 396 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ETS1P14921 441 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 AREGP15514 252 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT1A6P19224 532 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 IMPDH1P20839 514 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 AHCYP23526 432 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 RPL9P32969 192 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT1A3P35503 534 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 UGT1A5P35504 534 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 TRIM23P36406 574 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC26A3P40879 764 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC1A4P43007 532 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 NSFP46459 744 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC26A2P50443 739 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ETV1P50549 477 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CRYBA2P53672 197 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 TMBIM6P55061 237 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 AQP4P55087 323 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PEX3P56589 373 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 BACE1P56817 501 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SRPXP78539 464 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 GALK2Q01415 458 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PRKCEQ02156 737 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 GBE1Q04446 702 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 MFGE8Q08431 387 aaPredicted RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CD300CQ08708 224 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 RBBP4Q09028 425 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SMARCB1Q12824 385 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PPP1R8Q12972 351 aaKnown RBP3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 BAMBIQ13145 260 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 IDI1Q13907 227 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 POU6F1Q14863 301 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 SLC1A5Q15758 541 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ECSCRQ19T08 205 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 EPC2Q52LR7 807 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF343Q6P1L6 599 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 NT5DC3Q86UY8 548 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 KCNMB4Q86W47 210 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 GPBP1Q86WP2 473 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 CATSPER3Q86XQ3 398 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ZNF677Q86XU0 584 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 STHQ8IWL8 128 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 OR4N5Q8IXE1 308 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 Q8N377 158 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 RAB3IL1Q8TBN0 382 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 ENKURQ8TC29 256 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 FBXO25Q8TCJ0 367 aa3.16□□□□□ -1.9
ECHDC1-217ENST00000488087 PNPT1Q8TCS8 783 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms