RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 AKR1C2P52895 323 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 TAS2R60P59551 318 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 SPCS3P61009 180 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 AKR1C1Q04828 323 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 DOC2AQ14183 400 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 C2orf68Q2NKX9 166 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 TIGD5Q53EQ6 642 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 JMJD6Q6NYC1 403 aaPredicted RBP12.88□□□□□ -0.35
HDAC1-206ENST00000476391 MON1AQ86VX9 555 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 DCUN1D3Q8IWE4 304 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 NLGN1Q8N2Q7 840 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 SLC43A2Q8N370 569 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 ACBD7Q8N6N7 88 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 CHST14Q8NCH0 376 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 OR4D11Q8NGI4 311 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 FCAMRQ8WWV6 532 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 CNTNAP3BQ96NU0 1288 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 TEX12Q9BXU0 123 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 A4GALTQ9NPC4 353 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 ADARB2Q9NS39 739 aaKnown RBP12.88□□□□□ -0.35
HDAC1-206ENST00000476391 WBP1LQ9NX94 342 aa12.88□□□□□ -0.35
HDAC1-206ENST00000476391 TNFRSF10BO14763 440 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 BCL2L11O43521 198 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 OR2F2O95006 317 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 C8GP07360 202 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 SLC11A2P49281 568 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 LUMP51884 338 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-206ENST00000476391 MRPS10P82664 201 aaKnown RBP12.87□□□□□ -0.35
HDAC1-206ENST00000476391 ARHGAP1Q07960 439 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 OR2F1Q13607 317 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 RPS26P11Q5JNZ5 115 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-206ENST00000476391 UBXN11Q5T124 520 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 LYPLAL1Q5VWZ2 237 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 ARL9Q6T311 187 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF813Q6ZN06 617 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 BOLLQ8N9W6 283 aaKnown RBP12.87□□□□□ -0.35
HDAC1-206ENST00000476391 CD99L2Q8TCZ2 262 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 SLC38A5Q8WUX1 472 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 ALG8Q9BVK2 526 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 SMCO4Q9NRQ5 59 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 KLHL42Q9P2K6 505 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 C9orf170A2RU37 121 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 H0YIV9 168 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 TERTO14746 1132 aaKnown RBP12.87□□□□□ -0.35
HDAC1-206ENST00000476391 SLC31A2O15432 143 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 PCDH8O95206 1070 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 BCHEP06276 602 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 VSIG10L2P0DP72 767 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 CD22P20273 847 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 RAB2AP61019 212 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 DCAF12L2Q5VW00 463 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 TMEM71Q6P5X7 295 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 NUDT18Q6ZVK8 323 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 NLGN2Q8NFZ4 835 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 OR5D16Q8NGK9 328 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 WNT2BQ93097 391 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 RSPO3Q9BXY4 272 aaPredicted RBP12.87□□□□□ -0.35
HDAC1-206ENST00000476391 ASB8Q9H765 288 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 ASF1BQ9NVP2 202 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 PPP2R3BQ9Y5P8 575 aa12.87□□□□□ -0.35
HDAC1-206ENST00000476391 C17orf113A0A1B0GUU1 675 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 SURF4O15260 269 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ACTL6AO96019 429 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF8P17098 575 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ACRV1P26436 265 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 SOAT1P35610 550 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 PMELP40967 661 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 PPT1P50897 306 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 CCL23P55773 120 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 TAS2R43P59537 309 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF763Q0D2J5 394 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 PDE7AQ13946 482 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 RPL13AP3Q6NVV1 102 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 FAM151BQ6UXP7 276 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 OR1J4Q8NGS1 313 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 HMGB4Q8WW32 186 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ARL11Q969Q4 196 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 PPCDCQ96CD2 204 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 FCRL4Q96PJ5 515 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 GGACTQ9BVM4 153 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 TMEM121BQ9BXQ6 578 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ZDHHC5Q9C0B5 715 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 MAN2C1Q9NTJ4 1040 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 TAS2R10Q9NYW0 307 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 H2AFY2Q9P0M6 372 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-206ENST00000476391 H3BRB1 525 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 PYCARD-AS1I3L0S3 204 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 FGF16O43320 207 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 PEX10O60683 326 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ETHE1O95571 254 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 FURINP09958 794 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 ZNF286BP0CG31 522 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 GJA1P17302 382 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 RCC1P18754 421 aaPredicted RBP12.86□□□□□ -0.35
HDAC1-206ENST00000476391 NFYBP25208 207 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 IFNGR2P38484 337 aa12.86□□□□□ -0.35
HDAC1-206ENST00000476391 HTR5AP47898 357 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms