RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 FABP3P05413 133 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 LINGO3P0C6S8 592 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 RFPL3SP0C7P2 107 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 UBL4AP11441 157 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ITGA2P17301 1181 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PRKACGP22612 351 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 FASP25445 335 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PSMA4P25789 261 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 MST1P26927 711 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 RYKP34925 604 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 IDH2P48735 452 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 TMED10P49755 219 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 CLK3P49761 638 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 UCNP55089 124 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 SESN3P58005 492 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 HPCAP84074 193 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 RELBQ01201 579 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 OC90Q02509 493 aaPredicted RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 ZNF117Q03924 483 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PPP1R8Q12972 351 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 OR1C1Q15619 314 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ATP6AP1Q15904 470 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 HYAL4Q2M3T9 481 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TMEM44Q2T9K0 475 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TUSC1Q2TAM9 212 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 COL28A1Q2UY09 1125 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PLEKHN1Q494U1 663 aaPredicted RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 SLC25A53Q5H9E4 307 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ENTPD8Q5MY95 495 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ANKRD34AQ69YU3 496 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 OR2T5Q6IEZ7 315 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 BORAQ6PGQ7 559 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TBPL2Q6SJ96 375 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ZNF550Q7Z398 422 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PRICKLE2Q7Z3G6 844 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 GDF7Q7Z4P5 450 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ADGRG3Q86Y34 549 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PLCZ1Q86YW0 608 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 MISPQ8IVT2 679 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ZNF440Q8IYI8 595 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 CYP4Z2PQ8N1L4 340 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 RBMXL3Q8N7X1 1067 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 EXD3Q8N9H8 876 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ZNF527Q8NB42 609 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PSD4Q8NDX1 1056 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 OR2M3Q8NG83 312 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 OR4C15Q8NGM1 316 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 OR2T29Q8NH02 315 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 B4GALNT2Q8NHY0 566 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 VANGL1Q8TAA9 524 aaPredicted RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 RNF217Q8TC41 542 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 NRG4Q8WWG1 115 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 GEMIN6Q8WXD5 167 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 EXTL1Q92935 676 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 SLC38A4Q969I6 547 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 SCMH1Q96GD3 660 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 CENPNQ96H22 339 aaPredicted RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 CRELD1Q96HD1 420 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TMEM41AQ96HV5 264 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 RSRC1Q96IZ7 334 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 ZNF347Q96SE7 839 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 BARD1Q99728 777 aaKnown RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 PIP5K1AQ99755 562 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 SLC29A1Q99808 456 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 ZNF559Q9BR84 538 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TBL1XR1Q9BZK7 514 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TRIM2Q9C040 744 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 METTL7AQ9H8H3 244 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TIMMDC1Q9NPL8 285 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 AGPAT4Q9NRZ5 378 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 MAN2C1Q9NTJ4 1040 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 SACM1LQ9NTJ5 587 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 KLHL28Q9NXS3 571 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 TUBA8Q9NY65 449 aaPredicted RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 RHCGQ9UBD6 479 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 FBXL2Q9UKC9 423 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 PCDHGB6Q9Y5F9 930 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 MAGED1Q9Y5V3 778 aaPredicted RBP5.41□□□□□ -1.54
USP39-213ENST00000467885 CACNA1AO00555 2505 aa5.41□□□□□ -1.54
USP39-213ENST00000467885 CFAP47Q6ZTR5 3102 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 CEP295Q9C0D2 2601 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 A0A087WUU8 490 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 TRBV4-1A0A0J9YWV2 114 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 A0A1B0GWA3 101 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 A0A1W2PRQ8 180 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 ANKUB1A6NFN9 424 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 LRRC3CA6NJW4 275 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 G3V3Y1 287 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 H0Y3Z8 333 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 H0YHG0 523 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 GNB5O14775 395 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 HCRTR2O43614 444 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 SCO2O43819 266 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 NME2P1O60361 137 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 GLSO94925 669 aaPredicted RBP5.4□□□□□ -1.54
USP39-213ENST00000467885 BAG2O95816 211 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 LDLRP01130 860 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 GASTP01350 101 aa5.4□□□□□ -1.54
USP39-213ENST00000467885 P04436 131 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms