RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 QPRTQ15274 297 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 RGNQ15493 299 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 CTU2Q2VPK5 515 aaKnown RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 RPS26P11Q5JNZ5 115 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 SP5Q6BEB4 398 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 POMZP3Q6PJE2 187 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 CHMP1BQ7LBR1 199 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 P4HA3Q7Z4N8 544 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 DHDDSQ86SQ9 333 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ACBD4Q8NC06 268 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 FBXO27Q8NI29 283 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 GPR119Q8TDV5 335 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 WNT2BQ93097 391 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ZG16BQ96DA0 208 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 TMEM19Q96HH6 336 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF845Q96IR2 970 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ADGRG7Q96K78 797 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 MRGPRX4Q96LA9 322 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 KLHL15Q96M94 604 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 EXOSC3Q9NQT5 275 aaKnown RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 THUMPD1Q9NXG2 353 aaKnown RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF629Q9UEG4 869 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 LEF1Q9UJU2 399 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF175Q9Y473 711 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 TMEM247A6NEH6 219 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 AGAP5A6NIR3 686 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 ETV2O00321 342 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 TNFSF11O14788 317 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 DNAJA2O60884 412 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 NTN1O95631 604 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 DBIP07108 87 aaKnown RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 NUDT7P0C024 238 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 TFPTP0C1Z6 253 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 FCGR2AP12318 317 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 NID1P14543 1247 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 IGFBP2P18065 325 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 PGCP20142 388 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 PPIBP23284 216 aaKnown RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 CTSSP25774 331 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 SFTPDP35247 375 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 EIF1AXP47813 144 aaKnown RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 RAC1P63000 192 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 KCNJ10P78508 379 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 FOXF2Q12947 444 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 SELENBP1Q13228 472 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 PON3Q15166 354 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 SLC25A53Q5H9E4 307 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 MRPL2Q5T653 305 aaKnown RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 METTL21CQ5VZV1 264 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 PPP4R4Q6NUP7 873 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 C3orf33Q6P1S2 294 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 MEX3BQ6ZN04 569 aaKnown RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF836Q6ZNA1 936 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 ESPNLQ6ZVH7 1005 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 CMIPQ8IY22 773 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 PEX5LQ8IYB4 626 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 C10orf111Q8N326 155 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 OR10D3Q8NH80 312 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 OR2V1Q8NHB1 315 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 FNDC9Q8TBE3 224 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 SLC38A5Q8WUX1 472 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 ST8SIA1Q92185 356 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 FIG4Q92562 907 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF524Q96C55 264 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 INTS12Q96CB8 462 aaKnown RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 TREX2Q9BQ50 279 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 CPPED1Q9BRF8 314 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 THUMPD3Q9BV44 507 aaKnown RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 SFXN3Q9BWM7 321 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 ENKD1Q9H0I2 346 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 IKZF5Q9H5V7 419 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 A4GALTQ9NPC4 353 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 DNAJB12Q9NXW2 375 aaKnown RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 KLHL14Q9P2G3 628 aa11.6□□□□□ -0.55
COL5A1-206ENST00000465877 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-206ENST00000465877 EEF1E1-BLOC1S5C9J1V9 151 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 EEF1E1O43324 174 aaKnown RBP11.59□□□□□ -0.55
COL5A1-206ENST00000465877 RCBTB2O95199 551 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 IL18BPO95998 194 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 OPN1LWP04000 364 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 IL7RP16871 459 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 SHC1P29353 583 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 OPRM1P35372 400 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 GNA13Q14344 377 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 SGCBQ16585 318 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 LIN52Q52LA3 116 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 RNF220Q5VTB9 566 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 OR2A2Q6IF42 318 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 RETREG3Q86VR2 466 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 LILRA2Q8N149 483 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 DPP10Q8N608 796 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 C10orf82Q8WW14 230 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 CNOT9Q92600 299 aaKnown RBP11.59□□□□□ -0.55
COL5A1-206ENST00000465877 PMM1Q92871 262 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 MAL2Q969L2 176 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 ZNF317Q96PQ6 595 aaPredicted RBP11.59□□□□□ -0.55
COL5A1-206ENST00000465877 SPOCK3Q9BQ16 436 aa11.59□□□□□ -0.55
COL5A1-206ENST00000465877 COQ10BQ9H8M1 238 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms