RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 QPRTQ15274 297 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 MAPK14Q16539 360 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 CXorf67Q86X51 503 aaPredicted RBP18.52■□□□□ 0.56
SDC1-205ENST00000447124 ANKRD42Q8N9B4 389 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 RAB8BQ92930 207 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 ZG16BQ96DA0 208 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 HS3ST6Q96QI5 342 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 ZNF350Q9GZX5 532 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 LAT2Q9GZY6 243 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 DLL4Q9NR61 685 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 FREM1Q5H8C1 2179 aa18.52■□□□□ 0.56
SDC1-205ENST00000447124 PRAMEF27A3QJZ7 478 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 STX11O75558 287 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 IL12AP29459 219 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 HOXC12P31275 282 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 NME5P56597 212 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 UFM1P61960 85 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 ZNF239Q16600 458 aaKnown RBP18.51■□□□□ 0.55
SDC1-205ENST00000447124 ANXA8L1Q5VT79 327 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 AP1ARQ63HQ0 302 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 SAXO2Q658L1 398 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 OGFOD2Q6N063 350 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 TNFAIP8L2Q6P589 184 aaPredicted RBP18.51■□□□□ 0.55
SDC1-205ENST00000447124 NUFIP2Q7Z417 695 aaKnown RBP18.51■□□□□ 0.55
SDC1-205ENST00000447124 KRTAP1-3Q8IUG1 177 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 LRRC34Q8IZ02 419 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 WFDC11Q8NEX6 87 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 RNF128Q8TEB7 428 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 ABHD3Q8WU67 409 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 XAGE5Q8WWM1 108 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 MRGPRX4Q96LA9 322 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 THUMPD3Q9BV44 507 aaKnown RBP18.51■□□□□ 0.55
SDC1-205ENST00000447124 NF1P21359 2839 aa18.51■□□□□ 0.55
SDC1-205ENST00000447124 FLNAP21333 2647 aaKnown RBP18.5■□□□□ 0.55
SDC1-205ENST00000447124 KLF4O43474 513 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 DIAPH2O60879 1101 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 BCAS1O75363 584 aaPredicted RBP18.5■□□□□ 0.55
SDC1-205ENST00000447124 AK1P00568 194 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 UBL4AP11441 157 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 ENPP1P22413 925 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 AGTR1P30556 359 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 PPP2R2AP63151 447 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 FUT5Q11128 374 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 SKP2Q13309 424 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 HHATQ5VTY9 493 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 GTF2IRD2BQ6EKJ0 949 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 TYW3Q6IPR3 259 aaKnown RBP18.5■□□□□ 0.55
SDC1-205ENST00000447124 GTF2IRD2Q86UP8 949 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 TUSC5Q8IXB3 177 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 C12orf49Q9H741 205 aa18.5■□□□□ 0.55
SDC1-205ENST00000447124 A0A1W2PNR3 127 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 C9JVG2 144 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 CYP7B1O75881 506 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 S100A3P33764 101 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 FAM174BQ3ZCQ3 159 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 CROCCP2Q86T23 111 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 TMCO5AQ8N6Q1 288 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 VPS37AQ8NEZ2 397 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 TOR1AIP2Q8NFQ8 470 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 CPNE4Q96A23 557 aaPredicted RBP18.49■□□□□ 0.55
SDC1-205ENST00000447124 NEURL3Q96EH8 262 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 SAP130Q9H0E3 1048 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 QRSL1Q9H0R6 528 aaKnown RBP18.49■□□□□ 0.55
SDC1-205ENST00000447124 GSX1Q9H4S2 264 aaPredicted RBP18.49■□□□□ 0.55
SDC1-205ENST00000447124 WDR55Q9H6Y2 383 aaPredicted RBP18.49■□□□□ 0.55
SDC1-205ENST00000447124 EXD2Q9NVH0 621 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 AIG1Q9NVV5 245 aa18.49■□□□□ 0.55
SDC1-205ENST00000447124 BEX4Q9NWD9 120 aaPredicted RBP18.49■□□□□ 0.55
SDC1-205ENST00000447124 ING1Q9UK53 422 aaPredicted RBP18.49■□□□□ 0.55
SDC1-205ENST00000447124 TMEM120BA0PK00 339 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 SNNO75324 88 aaPredicted RBP18.48■□□□□ 0.55
SDC1-205ENST00000447124 H6PDO95479 791 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 CSTAP01040 98 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 GUSBP08236 651 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 PGM1P36871 562 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 CCR4P51679 360 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 CLNS1AP54105 237 aaKnown RBP18.48■□□□□ 0.55
SDC1-205ENST00000447124 SESN3P58005 492 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 CBFBQ13951 182 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 TIGD2Q4W5G0 525 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 FRRS1Q6ZNA5 592 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 BEND4Q6ZU67 534 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 FCRLAQ7L513 359 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 C16orf62Q7Z3J2 963 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 HMGN2P46Q86SG4 172 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 KIRREL3Q8IZU9 778 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 MGARPQ8TDB4 240 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 ZFP90Q8TF47 636 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 ROPN1LQ96C74 230 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 CCDC115Q96NT0 180 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 INPP5KQ9BT40 448 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 TIGARQ9NQ88 270 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 THAP1Q9NVV9 213 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 BTNL2Q9UIR0 455 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 GPR45Q9Y5Y3 372 aa18.48■□□□□ 0.55
SDC1-205ENST00000447124 IGHV3-15A0A0B4J1V0 119 aa18.47■□□□□ 0.55
SDC1-205ENST00000447124 GOLGA8QA0A0J9YX86 632 aa18.47■□□□□ 0.55
SDC1-205ENST00000447124 GOLGA8OA6NCC3 632 aa18.47■□□□□ 0.55
SDC1-205ENST00000447124 GJE1A6NN92 205 aa18.47■□□□□ 0.55
SDC1-205ENST00000447124 E9PBE3 544 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms