RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 AURKCQ9UQB9 309 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 KLHL20Q9Y2M5 609 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 WBP11Q9Y2W2 641 aaKnown RBP3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SNX8Q9Y5X2 465 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLCO1B1Q9Y6L6 691 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 AP1M2Q9Y6Q5 423 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 V9GYQ6 96 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 CEP290O15078 2479 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 BRWD1Q9NSI6 2320 aa3.52□□□□□ -1.85
HMGB3P20-201ENST00000417997 COL5A1P20908 1838 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 A0A0A6YYD5 115 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 RNF103-CHMP3A0A140T963 221 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 PRSS51A0A1B0GVH4 220 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 A0A1W2PRB8 838 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 DHRS12A0PJE2 317 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 C1orf226A1L170 272 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ELOVL7A1L3X0 281 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR2A25A4D2G3 310 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 LRIT2A6NDA9 550 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM221A6NGB7 291 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TLCD2A6NGC4 264 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 GABRR3A8MPY1 467 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 M0R296 226 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CXCR6O00574 342 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TXNDC9O14530 226 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 LCMT2O60294 686 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TPST1O60507 370 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 LDB3O75112 727 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ERAL1O75616 437 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SERPINI2O75830 405 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SCELO95171 688 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 KRT75O95678 551 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 GPIP06744 558 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM58BPP0C7Q3 252 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 UMPSP11172 480 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 LAMP1P11279 417 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CKMT1AP12532 417 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 NCK1P16333 377 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 GGT1P19440 569 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 IL10P22301 178 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 HIST1H1TP22492 207 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 GNLYP22749 145 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CPN2P22792 545 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ATP5A1P25705 553 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 MT3P25713 68 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 HOXA6P31267 233 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TLX1P31314 330 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 BSGP35613 385 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CDKN2CP42773 168 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 HNRNPFP52597 415 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR4D2P58180 307 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 VSX2P58304 361 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ERVFC1-1P60608 527 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SEC61A1P61619 476 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 PPP1CAP62136 330 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 BTN3A2P78410 334 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 MC1RQ01726 317 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TNFRSF17Q02223 184 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CHRNB3Q05901 458 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 HSPB3Q12988 150 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SRSF5Q13243 272 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLAMF1Q13291 335 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 PDE7AQ13946 482 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SELPLGQ14242 412 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TAF11Q15544 211 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZIC1Q15915 447 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 NDUFA9Q16795 377 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 DEFB110Q30KQ9 67 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM98BQ52LJ0 330 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 LRRC23Q53EV4 343 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 GCNT6Q5T4J0 391 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 GLYATQ6IB77 296 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 OR52E8Q6IFG1 317 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TYW3Q6IPR3 259 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 DLEU7Q6UYE1 221 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM92BQ6ZTR7 304 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 USP43Q70EL4 1123 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SFTPA2Q8IWL1 248 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZDHHC23Q8IYP9 409 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CLIP4Q8N3C7 705 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZCCHC7Q8N3Z6 543 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CSNK1A1LQ8N752 337 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARL10Q8N8L6 244 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TTC29Q8NA56 475 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZBTB8BQ8NAP8 495 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ICA1LQ8NDH6 482 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 FBXO30Q8TB52 745 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 NT5CQ8TCD5 201 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CREB3L4Q8TEY5 395 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 FAM216AQ8WUB2 273 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 POP5Q969H6 163 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZUFSPQ96AP4 578 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CIDECQ96AQ7 238 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM18Q96B42 140 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SDCCAG3Q96C92 435 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 C11orf24Q96F05 449 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZBED6CLQ96FA7 236 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 AURKBQ96GD4 344 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TXNDC15Q96J42 360 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms