RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 BCL2L10Q9HD36 194 aa6.96□□□□□ -1.3
CPSF4-202ENST00000412686 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.96□□□□□ -1.3
CPSF4-202ENST00000412686 DNAJB12Q9NXW2 375 aaKnown RBP6.96□□□□□ -1.3
CPSF4-202ENST00000412686 SUCOQ9UBS9 1254 aaKnown RBP6.96□□□□□ -1.3
CPSF4-202ENST00000412686 ADAM21Q9UKJ8 722 aa6.96□□□□□ -1.3
CPSF4-202ENST00000412686 ZNF443Q9Y2A4 671 aaPredicted RBP6.96□□□□□ -1.3
CPSF4-202ENST00000412686 SLC35A3Q9Y2D2 325 aa6.96□□□□□ -1.3
CPSF4-202ENST00000412686 POLEQ07864 2286 aa6.96□□□□□ -1.3
CPSF4-202ENST00000412686 A0A087WZY1 265 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 A0A0G2JNJ9 132 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 A0A0G2JPF8 293 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CDHR4A6H8M9 788 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 TMEM247A6NEH6 219 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CCT8L1PA6NM43 557 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CLCA1A8K7I4 914 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 HNRNPCL2B2RXH8 293 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 HNRNPCL3B7ZW38 293 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 C5orf58C9J3I9 102 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 FAM47E-STBD1D6RA91 191 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 RNF223E7ERA6 249 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 SLC22A2O15244 555 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 EIF4E2O60573 245 aaKnown RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 HNRNPCL1O60812 293 aaKnown RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 SHOX2O60902 331 aaPredicted RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 WDR1O75083 606 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 GCM2O75603 506 aaPredicted RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 NTN1O95631 604 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CLDN1O95832 211 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 EPPINO95925 133 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 PABPC4LP0CB38 370 aaKnown RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 HNRNPCL4P0DMR1 293 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CPN1P15169 458 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 ZNF17P17021 662 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 SLC6A2P23975 617 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 COL8A1P27658 744 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 SFTPDP35247 375 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 GCKP35557 465 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 NUDT2P50583 147 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 SUMO3P55854 103 aaPredicted RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 PER3P56645 1201 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 SESN3P58005 492 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 HOXC5Q00444 222 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 DMTNQ08495 405 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CBFBQ13951 182 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CTU2Q2VPK5 515 aaKnown RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 LIN52Q52LA3 116 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 ENPP6Q6UWR7 440 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 B3GNT6Q6ZMB0 384 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 NET1Q7Z628 596 aaPredicted RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 SERPINA11Q86U17 422 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CALHM3Q86XJ0 350 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 LIX1LQ8IVB5 337 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 PM20D2Q8IYS1 436 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 GTPBP8Q8N3Z3 284 aaPredicted RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 C9orf106Q8NAJ2 232 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 PCYOX1LQ8NBM8 494 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 TOR1AIP2Q8NFQ8 470 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 TNIP2Q8NFZ5 429 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 BBS10Q8TAM1 723 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 PHF10Q8WUB8 498 aaKnown RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 ZBTB8AQ96BR9 441 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 SDCCAG3Q96C92 435 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 USB1Q9BQ65 265 aaKnown RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 WFDC6Q9BQY6 131 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 PIGQQ9BRB3 760 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 MRGBPQ9NV56 204 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 ARL8BQ9NVJ2 186 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CMTM6Q9NX76 183 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 THUMPD1Q9NXG2 353 aaKnown RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CALML5Q9NZT1 146 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 Q9UFV3 132 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 PACSIN3Q9UKS6 424 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 CORO2BQ9UQ03 480 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 RNF6Q9Y252 685 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 ARL2BPQ9Y2Y0 163 aa6.95□□□□□ -1.3
CPSF4-202ENST00000412686 GPC6Q9Y625 555 aaPredicted RBP6.95□□□□□ -1.3
CPSF4-202ENST00000412686 FASNP49327 2511 aaKnown RBP6.94□□□□□ -1.3
CPSF4-202ENST00000412686 A0A0J9YW62 118 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 C7orf72A4D263 438 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 FAM90A27PA6NNH2 459 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 AHRRA9YTQ3 701 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 NME4O00746 187 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 EIF1AYO14602 144 aaKnown RBP6.94□□□□□ -1.3
CPSF4-202ENST00000412686 TNFSF11O14788 317 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 DNAJA2O60884 412 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 TGM6O95932 706 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 FAM107AO95990 144 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 THBS1P07996 1170 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 GABRA1P14867 456 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 KLK2P20151 261 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 CCNA2P20248 432 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 GRNP28799 593 aaKnown RBP6.94□□□□□ -1.3
CPSF4-202ENST00000412686 ACAA2P42765 397 aaKnown RBP6.94□□□□□ -1.3
CPSF4-202ENST00000412686 EIF1AXP47813 144 aaKnown RBP6.94□□□□□ -1.3
CPSF4-202ENST00000412686 IDH2P48735 452 aaKnown RBP6.94□□□□□ -1.3
CPSF4-202ENST00000412686 AGFG1P52594 562 aaKnown RBP6.94□□□□□ -1.3
CPSF4-202ENST00000412686 ZNF136P52737 540 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 CRYBA2P53672 197 aa6.94□□□□□ -1.3
CPSF4-202ENST00000412686 PCBP3P57721 371 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms