RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 UGT2B17O75795 530 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 PSMB1P20618 241 aaKnown RBP15.84■□□□□ 0.13
HDDC3-201ENST00000330334 SHC1P29353 583 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 AGTR1P30556 359 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 SFTPDP35247 375 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 BST1Q10588 318 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 FOXD4Q12950 439 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-201ENST00000330334 SELENBP1Q13228 472 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 SKP2Q13309 424 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 TMEM176BQ3YBM2 270 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-201ENST00000330334 PDZK1Q5T2W1 519 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 ATAD3BQ5T9A4 648 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 C22orf34Q6ZV56 151 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 ZNF550Q7Z398 422 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 CXorf67Q86X51 503 aaPredicted RBP15.84■□□□□ 0.13
HDDC3-201ENST00000330334 SLC43A2Q8N370 569 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 ST8SIA1Q92185 356 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 PIGTQ969N2 578 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 NEURL3Q96EH8 262 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 TACO1Q9BSH4 297 aaKnown RBP15.84■□□□□ 0.13
HDDC3-201ENST00000330334 HDHD5Q9BXW7 423 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 SAP130Q9H0E3 1048 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 KCNE5Q9UJ90 142 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 GPR52Q9Y2T5 361 aa15.84■□□□□ 0.13
HDDC3-201ENST00000330334 UQCRHLA0A096LP55 91 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 PRKD3O94806 890 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 FPR1P21462 350 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 LOXP28300 417 aaPredicted RBP15.83■□□□□ 0.12
HDDC3-201ENST00000330334 RAC3P60763 192 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 TXNL4AP83876 142 aaKnown RBP15.83■□□□□ 0.12
HDDC3-201ENST00000330334 LRRC74AQ0VAA2 488 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 QPRTQ15274 297 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 GPR68Q15743 365 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 EXOC3L2Q2M3D2 409 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 SAXO2Q658L1 398 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 EIF3MQ7L2H7 374 aaKnown RBP15.83■□□□□ 0.12
HDDC3-201ENST00000330334 C16orf62Q7Z3J2 963 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 SPATA19Q7Z5L4 167 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 LRRC75A-AS1Q8N1F1 130 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 CLEC4FQ8N1N0 589 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 ZNF614Q8N883 585 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 ZFP90Q8TF47 636 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 ROBO4Q8WZ75 1007 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 ZNF524Q96C55 264 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 PIK3IP1Q96FE7 263 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 CCDC115Q96NT0 180 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 SRXN1Q9BYN0 137 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 OR51I1Q9H343 314 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 PNPOQ9NVS9 261 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 THAP1Q9NVV9 213 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 KLHL13Q9P2N7 655 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 BTNL2Q9UIR0 455 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 MKLN1Q9UL63 735 aa15.83■□□□□ 0.12
HDDC3-201ENST00000330334 E9PBE3 544 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 KIAA0513O60268 411 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 THBDP07204 575 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 YES1P07947 543 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 S100A3P33764 101 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 ACKR1Q16570 336 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 NDUFAF6Q330K2 333 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 BEX5Q5H9J7 111 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 SPANXN4Q5MJ08 99 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 TMEM201Q5SNT2 666 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 HHATQ5VTY9 493 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 SHEQ5VZ18 495 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 FCRLAQ7L513 359 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 ANKRD46Q86W74 232 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 FAM71CQ8NEG0 241 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 ABHD3Q8WU67 409 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 XAGE5Q8WWM1 108 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 TMEM234Q8WY98 164 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 USB1Q9BQ65 265 aaKnown RBP15.82■□□□□ 0.12
HDDC3-201ENST00000330334 THUMPD3Q9BV44 507 aaKnown RBP15.82■□□□□ 0.12
HDDC3-201ENST00000330334 COQ10BQ9H8M1 238 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 SLC35A3Q9Y2D2 325 aa15.82■□□□□ 0.12
HDDC3-201ENST00000330334 TRPC5OSA6NMA1 111 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 SLCO1B7G3V0H7 640 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 SDHDO14521 159 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 HDAC3O15379 428 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 KLF4O43474 513 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 SNNO75324 88 aaPredicted RBP15.81■□□□□ 0.12
HDDC3-201ENST00000330334 CPSF4O95639 269 aaKnown RBP15.81■□□□□ 0.12
HDDC3-201ENST00000330334 CSTAP01040 98 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 OR12D1P0DN82 309 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 PGCP20142 388 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 FKBP2P26885 142 aaKnown RBP15.81■□□□□ 0.12
HDDC3-201ENST00000330334 PGM1P36871 562 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 RNF144AP50876 292 aaPredicted RBP15.81■□□□□ 0.12
HDDC3-201ENST00000330334 WDR4P57081 412 aaKnown RBP15.81■□□□□ 0.12
HDDC3-201ENST00000330334 FAM174BQ3ZCQ3 159 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 TIGD2Q4W5G0 525 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 ANKRD34AQ69YU3 496 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 TYW3Q6IPR3 259 aaKnown RBP15.81■□□□□ 0.12
HDDC3-201ENST00000330334 C20orf204Q6ZNR8 217 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 TMCO5AQ8N6Q1 288 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 RAB3IL1Q8TBN0 382 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 PAIP2Q9BPZ3 127 aaKnown RBP15.81■□□□□ 0.12
HDDC3-201ENST00000330334 BCO1Q9HAY6 547 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 SERINC1Q9NRX5 453 aa15.81■□□□□ 0.12
HDDC3-201ENST00000330334 ACER3Q9NUN7 267 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms