RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 BEST3Q8N1M1 668 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 S100A16Q96FQ6 103 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 MCOLN1Q9GZU1 580 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 OR52D1Q9H346 318 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 FN3KQ9H479 309 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 NEUROD4Q9HD90 331 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 PRSS44E7EML9 344 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 F5H5P2 479 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 UBL3O95164 117 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 ZP1P60852 638 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 NKPD1Q17RQ9 610 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 PAN3Q58A45 887 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 PRRT3Q5FWE3 981 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 ENTPD8Q5MY95 495 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 C6orf132Q5T0Z8 1188 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 SHEQ5VZ18 495 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 FAM71E1Q6IPT2 247 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 CMTM4Q8IZR5 234 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 ANKRD53Q8N9V6 530 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 SDR9C7Q8NEX9 313 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 FATE1Q969F0 183 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 AIF1LQ9BQI0 150 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 HCAR1Q9BXC0 346 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 BRF2Q9HAW0 419 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 HRASLSQ9HDD0 168 aa14.84□□□□□ -0.03
PRPF40B-201ENST00000261897 LCTP09848 1927 aa14.83□□□□□ -0.03
PRPF40B-201ENST00000261897 A0A1B0GV50 99 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 TMEM200CA6NKL6 621 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 H7C4K7 107 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 POP7O75817 140 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 MAPK8P45983 427 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 KCNJ3P48549 501 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 UBE2IP63279 158 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 C22orf39Q6P5X5 142 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 NXPE4Q6UWF7 544 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 IFNL1Q8IU54 200 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 SDR16C5Q8N3Y7 309 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 SYNPRQ8TBG9 265 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 SLC22A8Q8TCC7 542 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 PRRC1Q96M27 445 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 C14orf105Q9NVL8 296 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 KLHL9Q9P2J3 617 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 TESQ9UGI8 421 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 ZNF236Q9UL36 1845 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 TRBV23-1A0A0A0MS06 115 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 KCNAB3O43448 404 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 FCMRO60667 390 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 LEFTY1O75610 366 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 ANXA2P07355 339 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 HSD3B2P26439 372 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 MAT2AP31153 395 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 MC3RP41968 323 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 CCR4P51679 360 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 PSMD4P55036 377 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 KCNAB1Q14722 419 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 POMZP3Q6PJE2 187 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 ZNF627Q7L945 461 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 TBC1D19Q8N5T2 526 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 AMER3Q8N944 861 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 OR13C2Q8NGS9 318 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 BCL7CQ8WUZ0 217 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 PLD4Q96BZ4 506 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 KCNJ15Q99712 375 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 FKRPQ9H9S5 495 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 A0A1W2PS29 197 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 ARL6IP5O75915 188 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 C6P13671 934 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 SYN1P17600 705 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 MTNR1BP49286 362 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 KHKP50053 298 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 ZC3H14Q6PJT7 736 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 PXT1Q8NFP0 134 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 ZCCHC10Q8TBK6 192 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 SCARB1Q8WTV0 552 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 UBQLN3Q9H347 655 aa14.83□□□□□ -0.04
PRPF40B-201ENST00000261897 XIRP2A4UGR9 3374 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 EEF1E1-BLOC1S5C9J1V9 151 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 LINC01387J3KSC0 135 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 PLPP1O14494 284 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 CHRM4P08173 479 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 CCR9P51686 369 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 SKP1P63208 163 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 SP140Q13342 867 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 CRMP1Q14194 572 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 SSX6Q7RTT6 188 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 FAM219AQ8IW50 185 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 FAM181AQ8N9Y4 354 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 OR52E2Q8NGJ4 325 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 OR9A1PQ8NGU1 263 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 UBE2E3Q969T4 207 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 GAS2L1Q99501 681 aaPredicted RBP14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 TRPV4Q9HBA0 871 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 MBD2Q9UBB5 411 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 A0A1W2PRQ8 180 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 LRIT2A6NDA9 550 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 GFYI3L273 518 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 FZD6O60353 706 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 FADS1O60427 444 aa14.82□□□□□ -0.04
PRPF40B-201ENST00000261897 PRAMEF2O60811 474 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms