RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 SF3A2Q15428 464 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 TOMM34Q15785 309 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 DECR1Q16698 335 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 TIGD6Q17RP2 521 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ARMCX4Q5H9R4 360 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OR2G6Q5TZ20 316 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PRAMEF8Q5VWM4 474 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PRAMEF7Q5VXH5 474 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SLX4IPQ5VYV7 408 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OTPQ5XKR4 325 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PRSS48Q7RTY5 328 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 KANSL1Q7Z3B3 1105 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PPP1R3BQ86XI6 285 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CPOQ8IVL8 374 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 C9orf40Q8IXQ3 194 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ATP6V1C2Q8NEY4 427 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OR4F15Q8NGB8 312 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MYDGFQ969H8 173 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 BPIFA2Q96DR5 249 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CHCHD6Q9BRQ6 235 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 IFT27Q9BW83 186 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 RAB33BQ9H082 229 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OR51E2Q9H255 320 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OR52D1Q9H346 318 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MARCH7Q9H992 704 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PRMT8Q9NR22 394 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 SIDT1Q9NXL6 827 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 DNAJB12Q9NXW2 375 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 FBXL4Q9UKA2 621 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 HSPE1-MOB4S4R3N1 261 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MN1Q10571 1320 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 CCDC163A0A0D9SF12 145 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SERINC4A6NH21 518 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 C4orf47A7E2U8 309 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 FAM171A2A8MVW0 826 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 BLOC1S5-TXNDC5H3BN57 136 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 M0R082 166 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SOCS6O14544 535 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 POLR1CO15160 346 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 CNOT3O75175 753 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 OR5F1O95221 314 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 UTS2O95399 124 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 BCL10O95999 233 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 THBS1P07996 1170 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MRPL3P09001 348 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 ADORA3P0DMS8 318 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 DBTP11182 482 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 BMP7P18075 431 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 GADD45AP24522 165 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 DCKP27707 260 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 IL12BP29460 328 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 IFNGR2P38484 337 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MPLP40238 635 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CD79BP40259 229 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CLK1P49759 484 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 ENTPD1P49961 510 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 RPS6KA3P51812 740 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SMSP52788 366 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CXCR4P61073 352 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 COPZ1P61923 177 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 NFATC3Q12968 1075 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MADCAM1Q13477 382 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ANGPT1Q15389 498 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 TSTQ16762 297 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 SYT14P1Q58G82 188 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 BICRALQ6AI39 1079 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PLBD1Q6P4A8 553 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZCCHC12Q6PEW1 402 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 BORAQ6PGQ7 559 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SLC16A12Q6ZSM3 486 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MBOAT2Q6ZWT7 520 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 COX15Q7KZN9 410 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OAFQ86UD1 273 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 P2RY8Q86VZ1 359 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ERI1Q8IV48 349 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZSCAN1Q8NBB4 408 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ANKK1Q8NFD2 765 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OR8J1Q8NGP2 316 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZNF563Q8TA94 476 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZNF721Q8TF20 911 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZNF566Q969W8 418 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 FKBP10Q96AY3 582 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 LMF2Q9BU23 707 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 HCAR1Q9BXC0 346 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 HHATLQ9HCP6 504 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PRODH2Q9UF12 536 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SATB2Q9UPW6 733 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MED31Q9Y3C7 131 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 TCRBV16S1A1N1A0A5B0 115 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 UNC119BA6NIH7 251 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 J3QRK9 145 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 M0R3G1 203 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MEN1O00255 615 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SCDO00767 359 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 MAGEB4O15481 346 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 AHCYL1O43865 530 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PPP1R3DO95685 299 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CELA2AP08217 269 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 JUNBP17275 347 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 DRD5P21918 477 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms