RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 FLRT3Q9NZU0 649 aa12.05□□□□□ -0.48
CTSA-213ENST00000606782 EDARQ9UNE0 448 aa12.05□□□□□ -0.48
CTSA-213ENST00000606782 RNF103-CHMP3A0A140T963 221 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 A8MXE2 369 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 EEF1E1-BLOC1S5C9J1V9 151 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 EEF1E1O43324 174 aaKnown RBP12.04□□□□□ -0.48
CTSA-213ENST00000606782 SCO2O43819 266 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 NKX2-2O95096 273 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 ANP32DO95626 131 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 TGM6O95932 706 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 C1QCP02747 245 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 NGFRP08138 427 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 MATN1P21941 496 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 MAGEA8P43361 318 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 PRIM2P49643 509 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 MVDP53602 400 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 TMEM44Q2T9K0 475 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 MMEL1Q495T6 779 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 GTDC1Q4AE62 458 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 C6orf10Q5SRN2 563 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 CDC73Q6P1J9 531 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 PCYOX1LQ8NBM8 494 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 FAM110BQ8TC76 370 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 DUSP19Q8WTR2 217 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 MBD6Q96DN6 1003 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 DACH2Q96NX9 599 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 ACTRT3Q9BYD9 372 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 LIME1Q9H400 295 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 EFCAB1Q9HAE3 211 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 HHATLQ9HCP6 504 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 ARL8BQ9NVJ2 186 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 MED11Q9P086 117 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 VAPAQ9P0L0 249 aa12.04□□□□□ -0.48
CTSA-213ENST00000606782 RPH3AQ9Y2J0 694 aaPredicted RBP12.04□□□□□ -0.48
CTSA-213ENST00000606782 ZFHX3Q15911 3703 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 A0A1W2PNV4 684 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 CLIC1O00299 241 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 MSTNO14793 375 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 MRASO14807 208 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 TNFRSF21O75509 655 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 UTS2O95399 124 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 KRT75O95678 551 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 IGKV1D-16P01601 117 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 ACP2P11117 423 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 HK1P19367 917 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 LCN1P31025 176 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 GABRA3P34903 492 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 SOAT1P35610 550 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 CHI3L1P36222 383 aaPredicted RBP12.03□□□□□ -0.48
CTSA-213ENST00000606782 CLK3P49761 638 aaKnown RBP12.03□□□□□ -0.48
CTSA-213ENST00000606782 EEFSECP57772 596 aaKnown RBP12.03□□□□□ -0.48
CTSA-213ENST00000606782 C17orf67Q0P5P2 114 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 TP53BP2Q13625 1128 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 LASP1Q14847 261 aaKnown RBP12.03□□□□□ -0.48
CTSA-213ENST00000606782 AP1ARQ63HQ0 302 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 REP15Q6BDI9 236 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 OR2A2Q6IF42 318 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 PLXDC2Q6UX71 529 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 APOOLQ6UXV4 268 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 TRPM8Q7Z2W7 1104 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 MARCH3Q86UD3 253 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 GRAMD2AQ8IUY3 354 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 SLC16A11Q8NCK7 471 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 LINC01560Q8TB33 94 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 LRRC58Q96CX6 371 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 C1GALT1C1Q96EU7 318 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 RMND5BQ96G75 393 aaPredicted RBP12.03□□□□□ -0.48
CTSA-213ENST00000606782 NSL1Q96IY1 281 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 ANKRD27Q96NW4 1050 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 STACQ99469 402 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 CGREF1Q99674 301 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 YIPF4Q9BSR8 244 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 RBM24Q9BX46 236 aaKnown RBP12.03□□□□□ -0.48
CTSA-213ENST00000606782 PIGUQ9H490 435 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 SERHL2Q9H4I8 314 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 PTGES2Q9H7Z7 377 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 PLEKHF2Q9H8W4 249 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 EQTNQ9NQ60 294 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 DUSP22Q9NRW4 184 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 CCM2LQ9NUG4 571 aaPredicted RBP12.03□□□□□ -0.48
CTSA-213ENST00000606782 GID8Q9NWU2 228 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 GALNT8Q9NY28 637 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 TAGLN3Q9UI15 199 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 PACSIN3Q9UKS6 424 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 FAF1Q9UNN5 650 aaPredicted RBP12.03□□□□□ -0.48
CTSA-213ENST00000606782 ZNF337Q9Y3M9 751 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 NF1P21359 2839 aa12.03□□□□□ -0.48
CTSA-213ENST00000606782 GXYLT2A0PJZ3 443 aa12.02□□□□□ -0.49
CTSA-213ENST00000606782 OR2M5A3KFT3 312 aa12.02□□□□□ -0.49
CTSA-213ENST00000606782 DUXAA6NLW8 204 aa12.02□□□□□ -0.49
CTSA-213ENST00000606782 CCT8L1PA6NM43 557 aa12.02□□□□□ -0.49
CTSA-213ENST00000606782 ALG1L2C9J202 215 aa12.02□□□□□ -0.49
CTSA-213ENST00000606782 KRT16P08779 473 aa12.02□□□□□ -0.49
CTSA-213ENST00000606782 ALOX5P09917 674 aa12.02□□□□□ -0.49
CTSA-213ENST00000606782 T-ENOLP0DO92 83 aa12.02□□□□□ -0.49
CTSA-213ENST00000606782 SUCLG1P53597 346 aaKnown RBP12.02□□□□□ -0.49
CTSA-213ENST00000606782 TXNL4AP83876 142 aaKnown RBP12.02□□□□□ -0.49
CTSA-213ENST00000606782 NFYCQ13952 458 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms