RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CDKN2CP42773 168 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 SUMO3P55854 103 aaPredicted RBP20.32■□□□□ 0.84
CCDC9-204ENST00000599398 RAC1P63000 192 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 SIRPAP78324 504 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 FOXF1Q12946 379 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 HEPHL1Q6MZM0 1159 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 RNF130Q86XS8 419 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 ZNF350Q9GZX5 532 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 WDR45Q9Y484 360 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 SPG11Q96JI7 2443 aa20.32■□□□□ 0.84
CCDC9-204ENST00000599398 TNFSF12-TNFSF13A0A0A6YY99 330 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 HMGB1P1B2RPK0 211 aaPredicted RBP20.31■□□□□ 0.84
CCDC9-204ENST00000599398 TNFSF13O75888 250 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 C1QCP02747 245 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 IL6P05231 212 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 CRHP06850 196 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 FCGR2AP12318 317 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 PSMA4P25789 261 aaKnown RBP20.31■□□□□ 0.84
CCDC9-204ENST00000599398 HPCAP84074 193 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 ZNF141Q15928 474 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 GPAT3Q53EU6 434 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 EPGNQ6UW88 154 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 TOR1AIP2Q8NFQ8 470 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 OR10D3Q8NH80 312 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 FBXO27Q8NI29 283 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 ROPN1LQ96C74 230 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 SLCO1B3Q9NPD5 702 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 ZIM2Q9NZV7 527 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 KCNE5Q9UJ90 142 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 CCDC168Q8NDH2 2452 aa20.31■□□□□ 0.84
CCDC9-204ENST00000599398 CENPVL1A0A0U1RR11 272 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 TUBAL3A6NHL2 446 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 RFXANKO14593 260 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 TNFSF11O14788 317 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 EIF4E2O60573 245 aaKnown RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 UGT2B17O75795 530 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 CSTAP01040 98 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 H2AFXP16104 143 aaPredicted RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 IL11P20809 199 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 SFTPDP35247 375 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 CPOXP36551 454 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 ANXA11P50995 505 aaKnown RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 TOMM34Q15785 309 aaPredicted RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 PDSS1Q5T2R2 415 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 VWA1Q6PCB0 445 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 DNAJC14Q6Y2X3 702 aaPredicted RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 LILRA2Q8N149 483 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 OR2V1Q8NHB1 315 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 PNPT1Q8TCS8 783 aaKnown RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 GPR119Q8TDV5 335 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 VIPAS39Q9H9C1 493 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 RNF122Q9H9V4 155 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 SDR39U1Q9NRG7 319 aaPredicted RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 PAQR5Q9NXK6 330 aaPredicted RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 GALNT8Q9NY28 637 aa20.3■□□□□ 0.84
CCDC9-204ENST00000599398 MCTS1Q9ULC4 181 aaKnown RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 GPC6Q9Y625 555 aaPredicted RBP20.3■□□□□ 0.84
CCDC9-204ENST00000599398 HMGN4O00479 90 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 POLR3GO15318 223 aaPredicted RBP20.29■□□□□ 0.84
CCDC9-204ENST00000599398 CXCL13O43927 109 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 KIAA0513O60268 411 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 AQP8O94778 261 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 SYNGR4O95473 234 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 ANP32DO95626 131 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 FUT5Q11128 374 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 CBFBQ13951 182 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 HBMQ6B0K9 141 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 TYW3Q6IPR3 259 aaKnown RBP20.29■□□□□ 0.84
CCDC9-204ENST00000599398 ESPNLQ6ZVH7 1005 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 EIF3MQ7L2H7 374 aaKnown RBP20.29■□□□□ 0.84
CCDC9-204ENST00000599398 LURAP1LQ8IV03 231 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 MIER2Q8N344 545 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 OR9I1Q8NGQ6 314 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 OR5W2Q8NH69 310 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 LINC01560Q8TB33 94 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 FAM222BQ8WU58 562 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 STARD4Q96DR4 205 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 KLHL15Q96M94 604 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 TCF7L2Q9NQB0 619 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 POLE3Q9NRF9 147 aa20.29■□□□□ 0.84
CCDC9-204ENST00000599398 INTS9Q9NV88 658 aaKnown RBP20.29■□□□□ 0.84
CCDC9-204ENST00000599398 UQCRHLA0A096LP55 91 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 A0A0J9YW62 118 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 ADAMDEC1O15204 470 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 PLGP00747 810 aaPredicted RBP20.28■□□□□ 0.84
CCDC9-204ENST00000599398 UBTFL6P0CB48 400 aaPredicted RBP20.28■□□□□ 0.84
CCDC9-204ENST00000599398 PRKCAP17252 672 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 ELK4P28324 431 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 ADH6P28332 368 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 KIR2DL2P43627 348 aaPredicted RBP20.28■□□□□ 0.84
CCDC9-204ENST00000599398 SLC6A8P48029 635 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 POLR2JP52435 117 aaKnown RBP20.28■□□□□ 0.84
CCDC9-204ENST00000599398 PPP2R2AP63151 447 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 SORDQ00796 357 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 SKP2Q13309 424 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 QPRTQ15274 297 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 MAPK14Q16539 360 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 CTU2Q2VPK5 515 aaKnown RBP20.28■□□□□ 0.84
CCDC9-204ENST00000599398 TIGD2Q4W5G0 525 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 FRRS1Q6ZNA5 592 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms