RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 TRIM33Q9UPN9 1127 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 OR10H1Q9Y4A9 318 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 AP4B1Q9Y6B7 739 aa14.71□□□□□ -0.05
SHKBP1-215ENST00000597649 SOD3P08294 240 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 IDO1P14902 403 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 DDCP20711 480 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 PRPS1L1P21108 318 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 STX1BP61266 288 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 PSPHP78330 225 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 MRPS22P82650 360 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 VEZF1Q14119 521 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 PTGR1Q14914 329 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 SGCBQ16585 318 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 GSTA3Q16772 222 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 GLYR1Q49A26 553 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 APOOLQ6UXV4 268 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 HIPK1Q86Z02 1210 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 OR6K3Q8NGY3 331 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 PPCDCQ96CD2 204 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 ZBTB18Q99592 522 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 NPAS1Q99742 590 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 ELAC2Q9BQ52 826 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 ACTR6Q9GZN1 396 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 REEP4Q9H6H4 257 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 SLC35C2Q9NQQ7 365 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 AIG1Q9NVV5 245 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 SH3BP4Q9P0V3 963 aa14.7□□□□□ -0.06
SHKBP1-215ENST00000597649 GMFGO60234 142 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 SS18L1O75177 396 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 OPN1LWP04000 364 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 ALDOCP09972 364 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 DANCRP0C864 163 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 NCF2P19878 526 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 EIF1AXP47813 144 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 NME5P56597 212 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 CLDN8P56748 225 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 RPS3AP61247 264 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 RPS4XP62701 263 aaKnown RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 ZNF155Q12901 538 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 CYP27C1Q4G0S4 372 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 CGB2Q6NT52 195 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 MFSD12Q6NUT3 480 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 SAMD14Q8IZD0 417 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 STON2Q8WXE9 905 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 NEUROG1Q92886 237 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 MTERF3Q96E29 417 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 GMPPAQ96IJ6 420 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 ADGRG7Q96K78 797 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 BBS4Q96RK4 519 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 PTGES2Q9H7Z7 377 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 SDHAF3Q9NRP4 125 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 TAS2R9Q9NYW1 312 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 EMC9Q9Y3B6 208 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 CR1P17927 2039 aa14.69□□□□□ -0.06
SHKBP1-215ENST00000597649 IGLV3-32A0A0A0MS00 114 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 EIF1AYO14602 144 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 THBS1P07996 1170 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 FCGR2AP12318 317 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 DRD4P21917 467 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 ACVR1BP36896 505 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 CLNS1AP54105 237 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 CPTPQ5TA50 214 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 METTL21CQ5VZV1 264 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 ALKBH2Q6NS38 261 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 PPP4R4Q6NUP7 873 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 ADAM5Q6NVV9 412 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 PODNL1Q6PEZ8 512 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 SPATA21Q7Z572 469 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 MTERF4Q7Z6M4 381 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 MIER2Q8N344 545 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 PRRG4Q9BZD6 226 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 YAE1D1Q9NRH1 226 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 ATAD3AQ9NVI7 634 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 FAM120CQ9NX05 1096 aaKnown RBP14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 ABCG2Q9UNQ0 655 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 GPR52Q9Y2T5 361 aa14.68□□□□□ -0.06
SHKBP1-215ENST00000597649 SCAMP2O15127 329 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 CD5LO43866 347 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 NDUFS7O75251 213 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 PSMG1O95456 288 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 NTN1O95631 604 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 IL33O95760 270 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 PSMB1P20618 241 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 NTSP30990 170 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 MPIP34949 423 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 IDUAP35475 653 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 CDKN1AP38936 164 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 CTBP2P56545 445 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 IRX1P78414 480 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 TSC22D1Q15714 1073 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 PGS1Q32NB8 556 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 PDCD4Q53EL6 469 aaKnown RBP14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 ANKRD26P1Q6NSI1 321 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 DNM1P46Q6ZS02 220 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 ATG4DQ86TL0 474 aaPredicted RBP14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 KRTCAP2Q8N6L1 136 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 OR10D3Q8NH80 312 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 KLHDC3Q9BQ90 382 aa14.67□□□□□ -0.06
SHKBP1-215ENST00000597649 SLCO5A1Q9H2Y9 848 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms