RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PTGES3Q15185 160 aaKnown RBP15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 DCST1Q5T197 706 aa15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 BICRALQ6AI39 1079 aa15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF770Q6IQ21 691 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 LURAP1LQ8IV03 231 aa15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 OR6T1Q8NGN1 323 aa15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 CREB3L1Q96BA8 519 aa15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 CCDC3Q9BQI4 270 aa15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 BCL2L10Q9HD36 194 aa15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 NDUFB11Q9NX14 153 aa15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 PLEKHB1Q9UF11 243 aaPredicted RBP15.88■□□□□ 0.13
SHKBP1-205ENST00000594973 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 CTSBP07858 339 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC2A2P11168 524 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF10P21506 573 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 MAN2A2P49641 1150 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 MAZP56270 477 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 DBPQ10586 325 aaPredicted RBP15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 SF3A2Q15428 464 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF628Q5EBL2 1059 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 TMEM81Q6P7N7 255 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 OOSP2Q86WS3 158 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 CSNK1A1LQ8N752 337 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC16A11Q8NCK7 471 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 OR9Q1Q8NGQ5 310 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC7A13Q8TCU3 470 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 AP3S1Q92572 193 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC9A6Q92581 669 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 GIMAP5Q96F15 307 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 SOSTQ9BQB4 213 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 SPATA5L1Q9BVQ7 753 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 GPR27Q9NS67 375 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 CLN6Q9NWW5 311 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 NLKQ9UBE8 527 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 DIMT1Q9UNQ2 313 aaKnown RBP15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC22A7Q9Y694 548 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 CLCA3PQ9Y6N3 262 aa15.87■□□□□ 0.13
SHKBP1-205ENST00000594973 TUBAL3A6NHL2 446 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 INMT-MINDY4F8WBC2 141 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 CDRT1O95170 752 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 SOX14O95416 240 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 HK1P19367 917 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 BLKP51451 505 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 CDC42P60953 191 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 POU4F3Q15319 338 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ARMC6Q6NXE6 501 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ADAMTS15Q8TE58 950 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 RBPMSQ93062 196 aaKnown RBP15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 MED18Q9BUE0 208 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 PRR14Q9BWN1 585 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 FOXQ1Q9C009 403 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 GALNT9Q9HCQ5 603 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF304Q9HCX3 659 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 EMC7Q9NPA0 242 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ENOPH1Q9UHY7 261 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 A4GNTQ9UNA3 340 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC9A8Q9Y2E8 581 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 A0A0G2JPF8 293 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 FAM221BA6H8Z2 402 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 HNRNPCL2B2RXH8 293 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 HNRNPCL3B7ZW38 293 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 FRS3O43559 492 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 FCMRO60667 390 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 IGFBP1P08833 259 aaPredicted RBP15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ADRA2AP08913 450 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 HNRNPCL4P0DMR1 293 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ST6GAL1P15907 406 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 SHC2P98077 582 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF311Q5JNZ3 666 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 CLVS2Q5SYC1 327 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 BMP8AQ7Z5Y6 402 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF687Q8N1G0 1237 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 ACTRT3Q9BYD9 372 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC38A1Q9H2H9 487 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 FAM60AQ9NP50 221 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 UBQLN2Q9UHD9 624 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 GLS2Q9UI32 602 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 MGAT4AQ9UM21 535 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 RNF215Q9Y6U7 377 aa15.86■□□□□ 0.13
SHKBP1-205ENST00000594973 CHURC1-FNTBB4DL54 471 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF217O75362 1048 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 WNT1P04628 370 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 PPM1FP49593 454 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 PPP3R1P63098 170 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 HNRNPA0Q13151 305 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 DOC2BQ14184 412 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 SPHARQ15513 63 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 TRMT12Q53H54 448 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 MEDAGQ5VYS4 303 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 RNF44Q7L0R7 432 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 VRK2Q86Y07 508 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC34A3Q8N130 599 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF655Q8N720 491 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 TMEM52Q8NDY8 209 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 ATP6V1C2Q8NEY4 427 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC35A4Q96G79 324 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 KCNJ15Q99712 375 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 FNDC11Q9BVV2 318 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 PPP1R3EQ9H7J1 279 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 IL21RQ9HBE5 538 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms