RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 CGAP01215 116 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 EPXP11678 715 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 DDX5P17844 614 aaKnown RBP12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 CPOXP36551 454 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 PEX19P40855 299 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 CPA2P48052 419 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 IST1P53990 364 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 SF3A3Q12874 501 aaKnown RBP eCLIP12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 FOXF1Q12946 379 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 TOMM34Q15785 309 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 KIF18BQ86Y91 864 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 KIRREL3Q8IZU9 778 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 NATD1Q8N6N6 113 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 OR8J2Q8NGG1 315 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 B4GALNT2Q8NHY0 566 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 ACTRT2Q8TDY3 377 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 LRRC46Q96FV0 321 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 SDF2Q99470 211 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 PRPF18Q99633 342 aaKnown RBP12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 PIGMQ9H3S5 423 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 ICAM5Q9UMF0 924 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 FAF1Q9UNN5 650 aaPredicted RBP12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 ZNF175Q9Y473 711 aa12.57□□□□□ -0.4
TNFAIP2-207ENST00000560562 A0A087WZY1 265 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 A0A0J9YW62 118 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 RNF103-CHMP3A0A140T963 221 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 RNASET2O00584 256 aaKnown RBP12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 SIAH2O43255 324 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 SMNDC1O75940 238 aaKnown RBP eCLIP12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 CRHP06850 196 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 NID1P14543 1247 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 HPGDP15428 266 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 IL12AP29459 219 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 EIF1AXP47813 144 aaKnown RBP12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 NME5P56597 212 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 FAM27E3Q08E93 113 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 FUT5Q11128 374 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 SPANXN4Q5MJ08 99 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 SPNS3Q6ZMD2 512 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 CHMP1BQ7LBR1 199 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 C6orf120Q7Z4R8 191 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 FITM2Q8N6M3 262 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 OR10D3Q8NH80 312 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 PHOSPHO1Q8TCT1 267 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 ZBTB8AQ96BR9 441 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 MOAP1Q96BY2 351 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 DPY30Q9C005 99 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 NPHS2Q9NP85 383 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 CLEC4AQ9UMR7 237 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 CARD8Q9Y2G2 431 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 DSCAMO60469 2012 aa12.56□□□□□ -0.4
TNFAIP2-207ENST00000560562 SH3D21A4FU49 640 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 ANKRD65E5RJM6 399 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 TNFSF11O14788 317 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 MSTNO14793 375 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 CXCL13O43927 109 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 FCMRO60667 390 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 DCTN3O75935 186 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 LBPP18428 481 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 ATP6V1C1P21283 382 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 MATN1P21941 496 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 ZNF41P51814 821 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 ART1P52961 327 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 ATP12AP54707 1039 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 EEFSECP57772 596 aaKnown RBP12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 POU4F3Q15319 338 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 OR2A2Q6IF42 318 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 OGFOD2Q6N063 350 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 C22orf34Q6ZV56 151 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 MISPQ8IVT2 679 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 CHDHQ8NE62 594 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 OR4A15Q8NGL6 344 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 TESCQ96BS2 214 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 SLC35G5Q96KT7 338 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 WDR55Q9H6Y2 383 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 CCM2LQ9NUG4 571 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 MARCOQ9UEW3 520 aaPredicted RBP12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 ST6GALNAC2Q9UJ37 374 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 PLEKHA6Q9Y2H5 1048 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 TESMINQ9Y4I5 508 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 CADP27708 2225 aa12.55□□□□□ -0.4
TNFAIP2-207ENST00000560562 GOLGA8QA0A0J9YX86 632 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 PRAMEF27A3QJZ7 478 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 GOLGA8OA6NCC3 632 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 GOLGA8NF8WBI6 632 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 ADAMDEC1O15204 470 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 BCAS1O75363 584 aaPredicted RBP12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 UBOX5O94941 541 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 CPSF4O95639 269 aaKnown RBP12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 HRGP04196 525 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 KRT16P08779 473 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 EPHA3P29320 983 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 UFM1P61960 85 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 RAC1P63000 192 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 PLAURQ03405 335 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 BNIP1Q12981 228 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 FAM174BQ3ZCQ3 159 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 PDZK1Q5T2W1 519 aa12.54□□□□□ -0.4
TNFAIP2-207ENST00000560562 HEPHL1Q6MZM0 1159 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms