RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZNF160Q9HCG1 818 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 SIRT3Q9NTG7 399 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ZCCHC3Q9NUD5 404 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 GID8Q9NWU2 228 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 TAGLN3Q9UI15 199 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 TEKT2Q9UIF3 430 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 PCDHGB3Q9Y5G1 929 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 HEMK1Q9Y5R4 338 aaPredicted RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 SNX8Q9Y5X2 465 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 MRPS18BQ9Y676 258 aaKnown RBP5.29□□□□□ -1.56
SCAF11-213ENST00000550629 ITPR1Q14643 2758 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 DMXL2Q8TDJ6 3036 aa5.29□□□□□ -1.56
SCAF11-213ENST00000550629 WDFY3Q8IZQ1 3526 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 IGHV3-20A0A0C4DH32 117 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 TRBV11-1A0A0K0K1C0 115 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 RNF103-CHMP3A0A140T963 221 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 LOC100653049A0A140TA62 436 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 C2orf92A0A1B0GVN3 265 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 FRG2CA6NGY1 282 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 DUXAA6NLW8 204 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 FXYD1O00168 92 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 MRASO14807 208 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 TO15178 435 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 PEX1O43933 1283 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 CEACAM4O75871 244 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ATP5HO75947 161 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 KRT34O76011 436 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ANP32DO95626 131 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 CPSF4O95639 269 aaKnown RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 CLPSP04118 112 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ALPPP05187 535 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 GUSBP08236 651 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 CT62P0C5K7 136 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 SPTBP11277 2137 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 NAGAP17050 411 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 GPX2P18283 190 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 LCN1P31025 176 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 SOAT1P35610 550 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 CHI3L1P36222 383 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 MAP3K8P41279 467 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 PRIM2P49643 509 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 KHKP50053 298 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 EMDP50402 254 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 PIGFQ07326 219 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 FADDQ13158 208 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 GAB1Q13480 694 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 GNA13Q14344 377 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 EBPQ15125 230 aaKnown RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 TRMT12Q53H54 448 aaKnown RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 PAGE3Q5JUK9 113 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF362Q5T0B9 420 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 REP15Q6BDI9 236 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 MFSD12Q6NUT3 480 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 FAM180BQ6P0A1 224 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 VWA1Q6PCB0 445 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 C6orf89Q6UWU4 347 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF621Q6ZSS3 439 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 C6orf120Q7Z4R8 191 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 DHDDSQ86SQ9 333 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 GPALPP1Q8IXQ4 340 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ADGRG5Q8IZF4 528 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 PRR18Q8N4B5 295 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 METTL25Q8N6Q8 603 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ZNF441Q8N8Z8 693 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 FAM98AQ8NCA5 519 aaKnown RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 OR52R1Q8NGF1 315 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 C16orf52Q8NHV5 167 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ZFP90Q8TF47 636 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 NTN5Q8WTR8 489 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 APOBEC4Q8WW27 367 aaKnown RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 OIT3Q8WWZ8 545 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 KAT2AQ92830 837 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 PMM1Q92871 262 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 NCLNQ969V3 563 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 LRRC58Q96CX6 371 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 RCN3Q96D15 328 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 HSPBAP1Q96EW2 488 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 GIMAP5Q96F15 307 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 NSL1Q96IY1 281 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ANKRD27Q96NW4 1050 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 STACQ99469 402 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 CGREF1Q99674 301 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 MESP1Q9BRJ9 268 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 SLC35A5Q9BS91 424 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 LMF2Q9BU23 707 aaKnown RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 NUDT9Q9BW91 350 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ACTRT3Q9BYD9 372 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 DEFB126Q9BYW3 111 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 WWTR1Q9GZV5 400 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 LHPPQ9H008 270 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ING2Q9H160 280 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 C1orf21Q9H246 121 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 EPS8L2Q9H6S3 715 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 TPT1P8Q9HAU6 139 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 DUSP22Q9NRW4 184 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 SLC25A37Q9NYZ2 338 aa5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 FAF1Q9UNN5 650 aaPredicted RBP5.28□□□□□ -1.56
SCAF11-213ENST00000550629 ERVK-11Q9UQG0 969 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms