RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 MTHFD2P13995 350 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 UCHL3P15374 230 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 GGT1P19440 569 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 IL11P20809 199 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 SERPINF1P36955 418 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 PPP1R2P41236 205 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 SLC6A8P48029 635 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 IDH3GP51553 393 aaPredicted RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 ZNF140P52738 457 aaPredicted RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 SUCLG1P53597 346 aaKnown RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 RPS13P62277 151 aaKnown RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 TNFRSF17Q02223 184 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 ID2Q02363 134 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 MGAT2Q10469 447 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 ITGADQ13349 1161 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 DPYSL3Q14195 570 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 ARHGAP19Q14CB8 494 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 ZNF585BQ52M93 769 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 TEDDM1Q5T9Z0 273 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 CCDC181Q5TID7 509 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 ZNF470Q6ECI4 717 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 PACS1Q6VY07 963 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 Q6ZTK2 550 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 SSX8Q7RTT4 187 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 PID1Q7Z2X4 250 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 RNF144BQ7Z419 303 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 RFX6Q8HWS3 928 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 MAP7D3Q8IWC1 876 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 CNTN4Q8IWV2 1026 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 ZNF595Q8IYB9 648 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 PRR22Q8IZ63 422 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 OR52N5Q8NH56 324 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 POC1BQ8TC44 478 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 LKAAEAR1Q8TD35 194 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 UTP15Q8TED0 518 aaKnown RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 DOK4Q8TEW6 326 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 ZNF721Q8TF20 911 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 RAB24Q969Q5 203 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 OXNAD1Q96HP4 312 aaPredicted RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 CARD6Q9BX69 1037 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 C1QTNF6Q9BXI9 259 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 G6PC2Q9NQR9 355 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 PLEK2Q9NYT0 353 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 NPAP1Q9NZP6 1156 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 EXO1Q9UQ84 846 aaKnown RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 R3HDM2Q9Y2K5 976 aaKnown RBP3.36□□□□□ -1.87
YBX3-205ENST00000536107 PLCE1Q9P212 2302 aa3.36□□□□□ -1.87
YBX3-205ENST00000536107 DNAH3Q8TD57 4116 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 A0A0G2JN53 185 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 C2orf92A0A1B0GVN3 265 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 SH3PXD2BA1X283 911 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 OR51F1A6NGY5 319 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 EFCAB8A8MWE9 144 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 B9A039 149 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 MYO1CO00159 1063 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 CTNSO60931 367 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 ICOSLGO75144 302 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 GCM2O75603 506 aaPredicted RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 IL33O95760 270 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 SLC16A8O95907 504 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 CATP04040 527 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 MYZAPP0CAP1 466 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 OSMP13725 252 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 MSNP26038 577 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 SRD5A2P31213 254 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 TLX1P31314 330 aaPredicted RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 PPARGP37231 505 aaPredicted RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 KHKP50053 298 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 HNRNPFP52597 415 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 SCAND1P57086 179 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 RAB38P57729 211 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 SESN3P58005 492 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 CTXN1P60606 82 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 DCTN2Q13561 401 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 SERTAD2Q14140 314 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 RCN2Q14257 317 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 GUSBP1Q15486 140 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 HADHQ16836 314 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 PCID2Q5JVF3 399 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 OR5M10Q6IEU7 315 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 SLC30A6Q6NXT4 461 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 KRTAP5-2Q701N4 177 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 KRT77Q7Z794 578 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 C17orf64Q86WR6 236 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 PLCZ1Q86YW0 608 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 GABRG1Q8N1C3 465 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 ZCCHC24Q8N2G6 241 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 OR4S1Q8NGB4 309 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 OR4K17Q8NGC6 315 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 OR5M1Q8NGP8 315 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 LINC01006Q8NI28 216 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 KCNJ9Q92806 393 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 PPWD1Q96BP3 646 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 LRRC45Q96CN5 670 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 RBM18Q96H35 190 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 CDKN2AIPNLQ96HQ2 116 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 REXO5Q96IC2 774 aaKnown RBP3.35□□□□□ -1.87
YBX3-205ENST00000536107 FCRL5Q96RD9 977 aa3.35□□□□□ -1.87
YBX3-205ENST00000536107 HBEGFQ99075 208 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms