RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 TRIM69Q86WT6 500 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 SLC43A2Q8N370 569 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZADH2Q8N4Q0 377 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 LRTM2Q8N967 370 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 SLC37A3Q8NCC5 494 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR13C5Q8NGS8 318 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 GOLGA5Q8TBA6 731 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 DDI1Q8WTU0 396 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 TM9SF4Q92544 642 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 FCGR1BQ92637 280 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 FBXO32Q969P5 355 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 AZIN2Q96A70 460 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 RBMXL1Q96E39 390 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 MED30Q96HR3 178 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 PIWIL1Q96J94 861 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 NKX3-1Q99801 234 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 ULBP3Q9BZM4 244 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 DDX31Q9H8H2 851 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 PELI2Q9HAT8 420 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 CNOT2Q9NZN8 540 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 CGNQ9P2M7 1197 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 WRAP73Q9P2S5 460 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 COPS7AQ9UBW8 275 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 BCAP29Q9UHQ4 241 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 ETV7Q9Y603 341 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 NYNRINQ9P2P1 1898 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 ABCA1O95477 2261 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 A0A0D9SFI3 127 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 IGHV5-10-1A0A0J9YXX1 117 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 SPTY2D1-AS1A0A0U1RR47 76 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 IQCMA0A1B0GVH7 501 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 FAM230AA0A1W2PPH8 454 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 H3BMM5 538 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CYTIPO60759 359 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 SYNGR4O95473 234 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 BMP15O95972 392 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 MT-ND2P03891 347 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 T-ENOLP0DO92 83 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CALCBP10092 127 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 PAX1P15863 534 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 ACKR3P25106 362 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 HLA-FP30511 346 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 DUTP33316 252 aaKnown RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CDKN2AP42771 156 aaKnown RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 SLC6A8P48029 635 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 PITPNBP48739 271 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 MYBPC1Q00872 1141 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 GCNT1Q02742 428 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 GABPB1Q06547 395 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 GPR50Q13585 617 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 RBM39Q14498 530 aaKnown RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 MEF2DQ14814 521 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CCDC142Q17RM4 750 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 TECRLQ5HYJ1 363 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 TMEM215Q68D42 235 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 ARHGAP17Q68EM7 881 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 NADSYN1Q6IA69 706 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 LRRC8BQ6P9F7 803 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 KDELC1Q6UW63 502 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 GCNT7Q6ZNI0 430 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 FOXL2NBQ6ZUU3 175 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CUZD1Q86UP6 607 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF589Q86UQ0 364 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 MISPQ8IVT2 679 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 KIRREL3Q8IZU9 778 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 DNAAF3Q8N9W5 541 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF383Q8NA42 475 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR4D10Q8NGI6 311 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR13A1Q8NGR1 328 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 NTN5Q8WTR8 489 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 DYRK2Q92630 601 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 N4BP2L2Q92802 583 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 NEUROG1Q92886 237 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 NCLNQ969V3 563 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 RAB39BQ96DA2 213 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CNDP1Q96KN2 507 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 PCDHB18PQ96TA0 734 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CBWD1Q9BRT8 395 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZPBPQ9BS86 351 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 FEM1AQ9BSK4 669 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CRACR2AQ9BSW2 395 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 NTMT1Q9BV86 223 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 LRRC61Q9BV99 259 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CARD6Q9BX69 1037 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 TCEAL2Q9H3H9 227 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 COQ10BQ9H8M1 238 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CENPMQ9NSP4 180 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 FAM212BQ9NTI7 297 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF319Q9P2F9 582 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF490Q9ULM2 529 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 CHMP2BQ9UQN3 213 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 MRPS7Q9Y2R9 242 aaKnown RBP4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 TENM3Q9P273 2699 aa4.1□□□□□ -1.75
HMGB1P23-201ENST00000518743 ATP6AP2A0A1C7CYW4 349 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 A8MU76 341 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 K7ERI5 159 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 SLC1A7O00341 560 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 MAPK13O15264 365 aa4.09□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZW10O43264 779 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms