RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 SSTR2P30874 369 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 ANXA11P50995 505 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 TLE4Q04727 773 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 CHRNEQ04844 493 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 FOXF1Q12946 379 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 PON3Q15166 354 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 ZNF141Q15928 474 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 MAPK14Q16539 360 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 SYPL1Q16563 259 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 GTDC1Q4AE62 458 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 FRRS1Q6ZNA5 592 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 LUZP2Q86TE4 346 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 GGNQ86UU5 652 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 ZNF619Q8N2I2 560 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 ANKFN1Q8N957 763 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 CNEP1R1Q8N9A8 125 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 ATP6V1C2Q8NEY4 427 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 TOR1AIP2Q8NFQ8 470 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 FBXO27Q8NI29 283 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 FNDC9Q8TBE3 224 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 GPR119Q8TDV5 335 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 ZG16BQ96DA0 208 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 TREX2Q9BQ50 279 aaPredicted RBP12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 CCDC28BQ9BUN5 200 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 SFXN3Q9BWM7 321 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 PRRG4Q9BZD6 226 aa12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 QRSL1Q9H0R6 528 aaKnown RBP12.73□□□□□ -0.37
CCHCR1-222ENST00000507459 C7orf72A4D263 438 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 TNFSF11O14788 317 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 KIAA0513O60268 411 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 EIF4E2O60573 245 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 UBTFL6P0CB48 400 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 NR2F1P10589 423 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 SFTPDP35247 375 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 EIF1P41567 113 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 CRATP43155 626 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 SUMO3P55854 103 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 RAC1P63000 192 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 CBFBQ13951 182 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 SLC2A7Q6PXP3 512 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 EIF3MQ7L2H7 374 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 LILRA2Q8N149 483 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 METTL25Q8N6Q8 603 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 OR5W2Q8NH69 310 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 OR10D3Q8NH80 312 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 ZFP90Q8TF47 636 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 RNASE6Q93091 150 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 C14orf79Q96F83 325 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 AURKBQ96GD4 344 aaPredicted RBP12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 ZNF559Q9BR84 538 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 THUMPD3Q9BV44 507 aaKnown RBP12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 LAT2Q9GZY6 243 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 SAP130Q9H0E3 1048 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 TPT1P8Q9HAU6 139 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 ZNF446Q9NWS9 450 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 CCDC167Q9P0B6 97 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 DCTN4Q9UJW0 460 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 L3MBTL1Q9Y468 752 aa12.72□□□□□ -0.37
CCHCR1-222ENST00000507459 HEATR5AQ86XA9 2040 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 ABCA12Q86UK0 2595 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 A0A0J9YW62 118 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 A0A1W2PNV4 684 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 NR5A2O00482 541 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 CXCL13O43927 109 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 SMNDC1O75940 238 aaKnown RBP eCLIP12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 PRKCAP17252 672 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 KIR2DL3P43628 341 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 CPA2P48052 419 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 SIRPAP78324 504 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 SKP2Q13309 424 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 FGFBP1Q14512 234 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 QPRTQ15274 297 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 HBMQ6B0K9 141 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 OR2A2Q6IF42 318 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 MSANTD1Q6ZTZ1 278 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 FUNDC1Q8IVP5 155 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 OR2V1Q8NHB1 315 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 GTF2H4Q92759 462 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 ZNF524Q96C55 264 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 TRNT1Q96Q11 434 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 RBM24Q9BX46 236 aaKnown RBP12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 NPHS2Q9NP85 383 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 LIPT1Q9Y234 373 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 ZNF175Q9Y473 711 aa12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 GPC6Q9Y625 555 aaPredicted RBP12.71□□□□□ -0.37
CCHCR1-222ENST00000507459 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 CLDN24A6NM45 220 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 EFNA2O43921 213 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 EDF1O60869 148 aaKnown RBP12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 BCAS1O75363 584 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 TNFSF13O75888 250 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 AQP8O94778 261 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 SYNGR4O95473 234 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 CHRM4P08173 479 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 GUSBP08236 651 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 ZCCHC18P0CG32 403 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 ETFAP13804 333 aa12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 NCF2P19878 526 aaPredicted RBP12.7□□□□□ -0.38
CCHCR1-222ENST00000507459 ADH6P28332 368 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms