RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 SMAD5Q99717 465 aaKnown RBP16.88■□□□□ 0.29
PDE8A-204ENST00000478717 MED18Q9BUE0 208 aa16.88■□□□□ 0.29
PDE8A-204ENST00000478717 SLC17A9Q9BYT1 436 aa16.88■□□□□ 0.29
PDE8A-204ENST00000478717 NKIRAS2Q9NYR9 191 aa16.88■□□□□ 0.29
PDE8A-204ENST00000478717 DENND4AQ7Z401 1863 aa16.88■□□□□ 0.29
PDE8A-204ENST00000478717 SSNA1O43805 119 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 APODP05090 189 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 ARHGDIBP52566 201 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 KIAA1024LP59773 190 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 IKZF1Q13422 519 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 SYT14P1Q58G82 188 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 ZNF687Q8N1G0 1237 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 OR4E2Q8NGC2 313 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 METTL17Q9H7H0 456 aaPredicted RBP16.87■□□□□ 0.29
PDE8A-204ENST00000478717 ZNF304Q9HCX3 659 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 WBP1LQ9NX94 342 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 MDC1Q14676 2089 aaKnown RBP16.87■□□□□ 0.29
PDE8A-204ENST00000478717 A0A1W2PRQ8 180 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 NR2F6P10588 404 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 CELP19835 753 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 DRD5P21918 477 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 TRA2BP62995 288 aaKnown RBP16.87■□□□□ 0.29
PDE8A-204ENST00000478717 OR8J1Q8NGP2 316 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 COQ8AQ8NI60 647 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 UFD1Q92890 307 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 FGF14Q92915 247 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 RFT1Q96AA3 541 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 UQCC2Q9BRT2 126 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 C6orf106Q9H6K1 298 aaPredicted RBP16.87■□□□□ 0.29
PDE8A-204ENST00000478717 MRPL39Q9NYK5 338 aaKnown RBP16.87■□□□□ 0.29
PDE8A-204ENST00000478717 OR6C2Q9NZP2 312 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 APOBEC3BQ9UH17 382 aaKnown RBP16.87■□□□□ 0.29
PDE8A-204ENST00000478717 ADAM30Q9UKF2 790 aa16.87■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3DA0A087WVF3 549 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3IA0A087WXS9 549 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3EA0A087X179 549 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3KA0A087X1G2 549 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3FA6NER0 549 aaPredicted RBP16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3LB9A6J9 549 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 EML2O95834 649 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3HP0C7X1 549 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 IGFALSP35858 605 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 MC3RP41968 323 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 MLLT1Q03111 559 aaPredicted RBP16.86■□□□□ 0.29
PDE8A-204ENST00000478717 BAMBIQ13145 260 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 GINS1Q14691 196 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 RPE65Q16518 533 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 DUSP6Q16828 381 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 C3orf38Q5JPI3 329 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 SFRP5Q5T4F7 317 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3GQ6DHY5 549 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3CQ6IPX1 549 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 LYPD4Q6UWN0 246 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TFAP2EQ6VUC0 442 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TBC1D3Q8IZP1 549 aaPredicted RBP16.86■□□□□ 0.29
PDE8A-204ENST00000478717 KCT2Q8NC54 265 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 OR9A2Q8NGT5 310 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 OR2T4Q8NH00 348 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 KAT2AQ92830 837 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 FBXL2Q9UKC9 423 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 BAIAP2Q9UQB8 552 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 CACNG2Q9Y698 323 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 C7orf66A4D0T2 115 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 MFSD2BA6NFX1 497 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 PRICKLE3O43900 615 aaPredicted RBP16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TCRBP04435 133 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 EIF4EP06730 217 aaKnown RBP16.86■□□□□ 0.29
PDE8A-204ENST00000478717 CD3GP09693 182 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 GIPRP48546 466 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 RPS21P63220 83 aaKnown RBP16.86■□□□□ 0.29
PDE8A-204ENST00000478717 TMEM35AQ53FP2 167 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 IGSF11Q5DX21 431 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 PARM1Q6UWI2 310 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 RD3Q7Z3Z2 195 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 PTP4A1Q93096 173 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 SFXN2Q96NB2 322 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 ZNF416Q9BWM5 594 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 C1QTNF2Q9BXJ5 285 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 PLA2G12AQ9BZM1 189 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 EGLN3Q9H6Z9 239 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 FGF22Q9HCT0 170 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 NDOR1Q9UHB4 597 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 GPR55Q9Y2T6 319 aaPredicted RBP16.86■□□□□ 0.29
PDE8A-204ENST00000478717 ZNF175Q9Y473 711 aa16.86■□□□□ 0.29
PDE8A-204ENST00000478717 ZNF98A6NK75 572 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 GPR89AB7ZAQ6 455 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 ADH1BP00325 375 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 HPXP02790 462 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 LPLP06858 475 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 GPR89BP0CG08 455 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 SMIM11AP58511 58 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 ZP1P60852 638 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 COX10Q12887 443 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 GNA13Q14344 377 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 LTB4RQ15722 352 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 C9orf50Q5SZB4 431 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 MRM1Q6IN84 353 aaKnown RBP16.85■□□□□ 0.29
PDE8A-204ENST00000478717 VRK2Q86Y07 508 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 ZNF527Q8NB42 609 aa16.85■□□□□ 0.29
PDE8A-204ENST00000478717 OR2L5Q8NG80 312 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms