RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	TMEM30A	Q9NV96	361 aa		6.06	□□□□□ -1.44
LRCH3-215	ENST00000476664	ASB6	Q9NWX5	421 aa		6.06	□□□□□ -1.44
LRCH3-215	ENST00000476664	TBC1D24	Q9ULP9	559 aa		6.06	□□□□□ -1.44
LRCH3-215	ENST00000476664	NUP205	Q92621	2012 aa		6.06	□□□□□ -1.44
LRCH3-215	ENST00000476664	SPG11	Q96JI7	2443 aa		6.06	□□□□□ -1.44
LRCH3-215	ENST00000476664	MUC22	E2RYF6	1773 aa	Predicted RBP	6.06	□□□□□ -1.44
LRCH3-215	ENST00000476664	F5	P12259	2224 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664		A0A1W2PNV4	684 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	ERICH2	A1L162	156 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664		H0YL77	283 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	CDX4	O14627	284 aa	Predicted RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	ZNF254	O75437	659 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	SORBS2	O94875	1100 aa	Known RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	POP4	O95707	220 aa	Known RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	ZNF286B	P0CG31	522 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	IGHV4-30-4	P0DP06	118 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	SRM	P19623	302 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	GLRA1	P23415	457 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	RPS5	P46782	204 aa	Known RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	CXCL12	P48061	93 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	SGSH	P51688	502 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	CDH6	P55285	790 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	MYL7	Q01449	175 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	TUBA3C	Q13748	450 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	KLF5	Q13887	457 aa	Predicted RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	LRRC37A5P	Q49AS3	106 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	OR4F3	Q6IEY1	312 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	TMEM53	Q6P2H8	277 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	TUBA3E	Q6PEY2	450 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	VIT	Q6UXI7	678 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664		Q6ZTK2	550 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	NET1	Q7Z628	596 aa	Predicted RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	KIAA1328	Q86T90	577 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	ACOT1	Q86TX2	421 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	STXBP6	Q8NFX7	210 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	OR4D5	Q8NGN0	318 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	ST8SIA1	Q92185	356 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	CIDEC	Q96AQ7	238 aa	Predicted RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	ARL5B	Q96KC2	179 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	PINK1	Q9BXM7	581 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	TRIM4	Q9C037	500 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	SEMA4C	Q9C0C4	833 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	SMYD3	Q9H7B4	428 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	PARVG	Q9HBI0	331 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	CHMP5	Q9NZZ3	219 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	C19orf25	Q9UFG5	118 aa	Predicted RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	MAN1B1	Q9UKM7	699 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	AGO1	Q9UL18	857 aa	Known RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	OR2W1	Q9Y3N9	320 aa		6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	6.05	□□□□□ -1.44
LRCH3-215	ENST00000476664	SPTBN1	Q01082	2364 aa	Known RBP	6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	EML5	Q05BV3	1969 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	TRBV5-5	A0A0J9YX44	114 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	SCO2	A0A1W2PP80	73 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	SH3PXD2B	A1X283	911 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	C5orf60	A6NFR6	353 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	MLNR	O43193	412 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	DUX1	O43812	170 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	CNOT3	O75175	753 aa	Known RBP	6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	H6PD	O95479	791 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	ATP1B1	P05026	303 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	SSTR2	P30874	369 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	SLC1A4	P43007	532 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	RFX5	P48382	616 aa	Predicted RBP	6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	AMT	P48728	403 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	CASP4	P49662	377 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	BCAP31	P51572	246 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	NDST1	P52848	882 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	DAOA	P59103	153 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	TIMM10	P62072	90 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	PHEX	P78562	749 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	BDH1	Q02338	343 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	TAF13	Q15543	124 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	ZNF699	Q32M78	642 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	TMEM119	Q4V9L6	283 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	PDZK1	Q5T2W1	519 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	FAM71F2	Q6NXP2	309 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	SLC24A5	Q71RS6	500 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	C5orf24	Q7Z6I8	188 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	LDLRAD3	Q86YD5	345 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	CENPS	Q8N2Z9	138 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	TEX26	Q8N6G2	289 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664		Q8N9G6	341 aa	Predicted RBP	6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	OR7A2P	Q8NGA2	310 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	OR13C3	Q8NGS6	347 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	LKAAEAR1	Q8TD35	194 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	ELMO1	Q92556	727 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	UPRT	Q96BW1	309 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	NXPE2	Q96DL1	559 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	SCRN2	Q96FV2	425 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	PCED1B	Q96HM7	432 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	C10orf90	Q96M02	699 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	DUX5	Q96PT3	197 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	DUSP26	Q9BV47	211 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	ANKRD60	Q9BZ19	345 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	IL22	Q9GZX6	179 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	LAT2	Q9GZY6	243 aa		6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	APOBEC3G	Q9HC16	384 aa	Known RBP	6.04	□□□□□ -1.44
LRCH3-215	ENST00000476664	UBAP1	Q9NZ09	502 aa		6.04	□□□□□ -1.44

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