RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 RIOK2Q9BVS4 552 aaKnown RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 NOX3Q9HBY0 568 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 MRTO4Q9UKD2 239 aaKnown RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 GIPP09681 153 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 GABRA1P14867 456 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 TRHRP34981 398 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 ERVK-25P63136 954 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 DHODHQ02127 395 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 GK2Q14410 553 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 TRMT11Q7Z4G4 463 aaKnown RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 HSD17B13Q7Z5P4 300 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 LGALS14Q8TCE9 139 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 RGMAQ96B86 450 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 TM4SF18Q96CE8 201 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 NARS2Q96I59 477 aaKnown RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 C4orf36Q96KX1 117 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 C7orf50Q9BRJ6 194 aaKnown RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 GINS4Q9BRT9 223 aa12.8□□□□□ -0.36
NPHP4-207ENST00000470763 AK6Q9Y3D8 172 aaKnown RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 KLF2Q9Y5W3 355 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-207ENST00000470763 A0A1B0GUH1 482 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 CARNS1A5YM72 827 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 MAGEB4O15481 346 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 HMGA1P17096 107 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 CST5P28325 142 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 IFNGR2P38484 337 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 OR12D2P58182 307 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 FUT5Q11128 374 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 PDSS1Q5T2R2 415 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ZNF697Q5TEC3 545 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 NXPE4Q6UWF7 544 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 GSG1LQ6UXU4 331 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 C11orf96Q7Z7L8 435 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 TPRA1Q86W33 373 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 OR52I2Q8NH67 350 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 LINC01599Q8WXQ3 324 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 OSTF1Q92882 214 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ORAI1Q96D31 301 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 IFT27Q9BW83 186 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 TEX12Q9BXU0 123 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 SLC6A20Q9NP91 592 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 FANCFQ9NPI8 374 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 NFKBIL1Q9UBC1 381 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 PLAGL1Q9UM63 463 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ANAPC1Q9H1A4 1944 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 J3QRE1 110 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 CDC42EP2O14613 210 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 PRKRAO75569 313 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 UCHL1P09936 223 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 MAOBP27338 520 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 PNLIPRP1P54315 467 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 LASP1Q14847 261 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ZDHHC20Q5W0Z9 365 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 C18orf63Q68DL7 685 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 FUT10Q6P4F1 479 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 GLDNQ6ZMI3 551 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 DNAJB7Q7Z6W7 309 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 VRK2Q86Y07 508 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 BOLLQ8N9W6 283 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 OR5M1Q8NGP8 315 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 OR8K3Q8NH51 312 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 AHCYL2Q96HN2 611 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ZNF768Q9H5H4 540 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 EXOSC3Q9NQT5 275 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 CAMK2AQ9UQM7 478 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ENTPD4Q9Y227 616 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 PCDHGA5Q9Y5G8 931 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 KCNE3Q9Y6H6 103 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 LTBP2Q14767 1821 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ANTXRLA6NF34 631 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 GLOD5A6NK44 160 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 CACNB4O00305 520 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 SOX1O00570 391 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 PRAF2O60831 178 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 C1orf105O95561 183 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 EGFP01133 1207 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 EPXP11678 715 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 RAP2BP61225 183 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 SNRPD1P62314 119 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 BDH1Q02338 343 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 TRAM2Q15035 370 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 LINC00303Q3SY05 128 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 IGSF11Q5DX21 431 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 FAM74A1Q5RGS3 127 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 CMTM4Q8IZR5 234 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 HDDC3Q8N4P3 179 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 CHST14Q8NCH0 376 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 OR2T33Q8NG76 320 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 TMEM255BQ8WV15 326 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 MYLIPQ8WY64 445 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 GIMAP5Q96F15 307 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 DERL3Q96Q80 235 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 NDC1Q9BTX1 674 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 OR51V1Q9H2C8 321 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ELAC1Q9H777 363 aaKnown RBP12.79□□□□□ -0.36
NPHP4-207ENST00000470763 MARCH5Q9NX47 278 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 ZMIZ1Q9ULJ6 1067 aa12.79□□□□□ -0.36
NPHP4-207ENST00000470763 OR2M5A3KFT3 312 aa12.78□□□□□ -0.36
NPHP4-207ENST00000470763 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms