RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 BCAS1O75363 584 aaPredicted RBP17.4■□□□□ 0.38
HOXA9-202ENST00000396345 TPOP07202 933 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 PABPC4LP0CB38 370 aaKnown RBP17.4■□□□□ 0.38
HOXA9-202ENST00000396345 ESRRAP11474 423 aaPredicted RBP17.4■□□□□ 0.38
HOXA9-202ENST00000396345 BMP7P18075 431 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 AQP1P29972 269 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 MNAT1P51948 309 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 SLC7A2P52569 658 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 GFRA1P56159 465 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 CBFBQ13951 182 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 ZSWIM7Q19AV6 140 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 VMACQ2NL98 169 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 NHSL2Q5HYW2 709 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 MRPL2Q5T653 305 aaKnown RBP17.4■□□□□ 0.38
HOXA9-202ENST00000396345 RAET1LQ5VY80 246 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 Q6ZPB1 254 aaPredicted RBP17.4■□□□□ 0.38
HOXA9-202ENST00000396345 CNOT9Q92600 299 aaKnown RBP17.4■□□□□ 0.38
HOXA9-202ENST00000396345 ABTB1Q969K4 478 aaPredicted RBP17.4■□□□□ 0.38
HOXA9-202ENST00000396345 ARSGQ96EG1 525 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 PIGQQ9BRB3 760 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 UGT2B28Q9BY64 529 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 ARMC7Q9H6L4 198 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 HEATR5AQ86XA9 2040 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 FAM220BPB1ANY3 271 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 NME4O00746 187 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 PRRG2O14669 202 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 SERPINB7O75635 380 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 ACTL6AO96019 429 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 STSP08842 583 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 CHMP24386 653 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 CASP6P55212 293 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 PCBP3P57721 371 aaKnown RBP17.39■□□□□ 0.37
HOXA9-202ENST00000396345 B3GALT5-AS1P59052 145 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 EEF1A1P68104 462 aaKnown RBP17.39■□□□□ 0.37
HOXA9-202ENST00000396345 PLAURQ03405 335 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 LIPEQ05469 1076 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 CRYZQ08257 329 aaKnown RBP17.39■□□□□ 0.37
HOXA9-202ENST00000396345 PLPPR5Q32ZL2 321 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 GXYLT1Q4G148 440 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 INTS11Q5TA45 600 aaKnown RBP17.39■□□□□ 0.37
HOXA9-202ENST00000396345 RNF220Q5VTB9 566 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 VASNQ6EMK4 673 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 ERICH5Q6P6B1 374 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 AAGABQ6PD74 315 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 TRPM8Q7Z2W7 1104 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 CD163Q86VB7 1156 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 OR2T12Q8NG77 320 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 OR5M1Q8NGP8 315 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 ZBTB8AQ96BR9 441 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 EXOSC3Q9NQT5 275 aaKnown RBP17.39■□□□□ 0.37
HOXA9-202ENST00000396345 DNAJB12Q9NXW2 375 aaKnown RBP17.39■□□□□ 0.37
HOXA9-202ENST00000396345 USP22Q9UPT9 525 aa17.39■□□□□ 0.37
HOXA9-202ENST00000396345 MED12Q93074 2177 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 TRGV8A0A0C4DH27 118 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 OR2M5A3KFT3 312 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 CDHR4A6H8M9 788 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 SHISA8B8ZZ34 492 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 LINGO3P0C6S8 592 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 PGCP20142 388 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 MXRA7P84157 204 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 TOMM34Q15785 309 aaPredicted RBP17.38■□□□□ 0.37
HOXA9-202ENST00000396345 C3AR1Q16581 482 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 WLSQ5T9L3 541 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 PATL1Q86TB9 770 aaKnown RBP17.38■□□□□ 0.37
HOXA9-202ENST00000396345 ARMC8Q8IUR7 673 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 CLIP4Q8N3C7 705 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 OR5M9Q8NGP3 310 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 FBXO27Q8NI29 283 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 TIMP4Q99727 224 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 RLIMQ9NVW2 624 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 SH3BGRL2Q9UJC5 107 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 TINAGQ9UJW2 476 aa17.38■□□□□ 0.37
HOXA9-202ENST00000396345 FLNCQ14315 2725 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 C7orf72A4D263 438 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 PRORSD1PA6NEY8 169 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 LINC01387J3KSC0 135 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 M0QX08 132 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 DNAJA2O60884 412 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 GCM2O75603 506 aaPredicted RBP17.37■□□□□ 0.37
HOXA9-202ENST00000396345 ZNF17P17021 662 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 PRKAR1BP31321 381 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 RYKP34925 604 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 EIF1P41567 113 aaKnown RBP17.37■□□□□ 0.37
HOXA9-202ENST00000396345 CA7P43166 264 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 SLC6A8P48029 635 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 SLC25A3Q00325 362 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 VEZF1Q14119 521 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 QPRTQ15274 297 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 TMEM44Q2T9K0 475 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 DCST1Q5T197 706 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 C1QL3Q5VWW1 255 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 DHRS4L2Q6PKH6 230 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 ENPP6Q6UWR7 440 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 DOLPP1Q86YN1 238 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 GRAMD2AQ8IUY3 354 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 ZNF440Q8IYI8 595 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 MICU2Q8IYU8 434 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 GTPBP8Q8N3Z3 284 aaPredicted RBP17.37■□□□□ 0.37
HOXA9-202ENST00000396345 SPAG4Q9NPE6 437 aa17.37■□□□□ 0.37
HOXA9-202ENST00000396345 PNPLA3Q9NST1 481 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms