RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 KIAA1217Q5T5P2 1943 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 F5H5P2 479 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 PRAMEF2O60811 474 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 PRPH2P23942 346 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 SSTR2P30874 369 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 EVI2BP34910 448 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 TSTD1Q8NFU3 115 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 NIPAL2Q9H841 368 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 PTTG3PQ9NZH4 202 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 FER1L6Q2WGJ9 1857 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 SLC5A10A0PJK1 596 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 IRF4Q15306 451 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 KIAA1211LQ6NV74 962 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 LRFN4Q6PJG9 635 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 RBM45Q8IUH3 476 aaKnown RBP16.3■□□□□ 0.2
PTPRU-202ENST00000373779 ZC3H10Q96K80 434 aaKnown RBP16.3■□□□□ 0.2
PTPRU-202ENST00000373779 CTRCQ99895 268 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 SYT4Q9H2B2 425 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 POLHQ9Y253 713 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 FZD6O60353 706 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 ADAM23O75077 832 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 AMY2AP04746 511 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 ZNF806P0C7X5 589 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 EMP3P54852 163 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 B3GLCTQ6Y288 498 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 GIMAP1Q8WWP7 306 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 SLC35B4Q969S0 331 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 APOOQ9BUR5 198 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 FBXO9Q9UK97 447 aaPredicted RBP16.3■□□□□ 0.2
PTPRU-202ENST00000373779 SBF2Q86WG5 1849 aa16.3■□□□□ 0.2
PTPRU-202ENST00000373779 MEN1O00255 615 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 SYT5O00445 386 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 ZNF208O43345 1280 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 LDB3O75112 727 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 HTR1FP30939 366 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 PRSS3P35030 304 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 SYT14P1Q58G82 188 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 SLC18B1Q6NT16 456 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 ZC3H14Q6PJT7 736 aaKnown RBP16.29■□□□□ 0.2
PTPRU-202ENST00000373779 TM9SF4Q92544 642 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 MYADMQ96S97 322 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 INSM2Q96T92 566 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-202ENST00000373779 IL23AQ9NPF7 189 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 SLC6A13Q9NSD5 602 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 NDUFB11Q9NX14 153 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 UGT2B7P16662 529 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 ASAH1Q13510 395 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 GK2Q14410 553 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-202ENST00000373779 PYCR3Q53H96 274 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 ALG10Q5BKT4 473 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 BTLAQ7Z6A9 289 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 TMEM234Q8WY98 164 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 MEPEQ9NQ76 525 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-202ENST00000373779 TEX13DA0A0J9YY54 714 aaPredicted RBP16.29■□□□□ 0.2
PTPRU-202ENST00000373779 SCO2O43819 266 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 CD34P28906 385 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 MBTPS1Q14703 1052 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 SAXO2Q658L1 398 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 OR13C2Q8NGS9 318 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 TANKQ92844 425 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 TIMM29Q9BSF4 260 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 V9GY05 133 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 A0A0G2JMP0 313 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 PLPP1O14494 284 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 PGCP20142 388 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 GRK5P34947 590 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 RNF113BQ8IZP6 322 aaKnown RBP16.29■□□□□ 0.2
PTPRU-202ENST00000373779 OR4M2Q8NGB6 313 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 HAVCR2Q8TDQ0 301 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 KLHDC7BQ96G42 594 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 PDXPQ96GD0 296 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 A0A1W2PPL8 197 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 A6NL46 340 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 CSF1P09603 554 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 PET100P0DJ07 73 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 HTR2AP28223 471 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 PLCXD2Q0VAA5 305 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 SFXN4Q6P4A7 337 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 ZER1Q7Z7L7 766 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 LNX2Q8N448 690 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 OR2L8Q8NGY9 312 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 ADAMTS18Q8TE60 1221 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 DZANK1Q9NVP4 752 aa16.29■□□□□ 0.2
PTPRU-202ENST00000373779 CSTBP04080 98 aaKnown RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 CHRNB1P11230 501 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 NR2C1P13056 603 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 SHC1P29353 583 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 CCINQ13939 588 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 KIR2DS3Q14952 304 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 RNASE10Q5GAN6 216 aaKnown RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 PRICKLE2Q7Z3G6 844 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 ZNF417Q8TAU3 575 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 ARRDC3Q96B67 414 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 GALNT9Q9HCQ5 603 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 TESQ9UGI8 421 aaKnown RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.28■□□□□ 0.2
PTPRU-202ENST00000373779 A8MVJ9 347 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 CPMP14384 443 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 ETV5P41161 510 aa16.28■□□□□ 0.2
PTPRU-202ENST00000373779 ETV1P50549 477 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms