RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 SLC43A1O75387 559 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 TALDO1P37837 337 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 TMEM240Q5SV17 173 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 AGBL4Q5VU57 503 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 SDE2Q6IQ49 451 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 LYPD4Q6UWN0 246 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 OR5J2Q8NH18 312 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 PIGKQ92643 395 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 SMARCD2Q92925 531 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 TRIM63Q969Q1 353 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 TEX12Q9BXU0 123 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 ISYNA1Q9NPH2 558 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 SIDT1Q9NXL6 827 aaKnown RBP18.44■□□□□ 0.54
CRLF3-201ENST00000324238 DPP7Q9UHL4 492 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 EXOGQ9Y2C4 368 aaKnown RBP18.44■□□□□ 0.54
CRLF3-201ENST00000324238 STON1Q9Y6Q2 735 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 PSMD9O00233 223 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 CHP2O43745 196 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 ANXA11P50995 505 aaKnown RBP18.44■□□□□ 0.54
CRLF3-201ENST00000324238 DGCR2P98153 550 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 SGCGQ13326 291 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 DECR1Q16698 335 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 CDC73Q6P1J9 531 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 NIPAL3Q6P499 406 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 SFXN4Q6P4A7 337 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 TMEM64Q6YI46 380 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 ZNF784Q8NCA9 323 aaPredicted RBP18.44■□□□□ 0.54
CRLF3-201ENST00000324238 PEX11GQ96HA9 241 aa18.44■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3DA0A087WVF3 549 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3IA0A087WXS9 549 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3EA0A087X179 549 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3KA0A087X1G2 549 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3FA6NER0 549 aaPredicted RBP18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3LB9A6J9 549 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3HP0C7X1 549 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 SLC6A1P30531 599 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 BTCP35070 178 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 THBS2P35442 1172 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 ZNF136P52737 540 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TP53I3Q53FA7 332 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3GQ6DHY5 549 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3CQ6IPX1 549 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 PRR23CQ6ZRP0 262 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TBC1D3Q8IZP1 549 aaPredicted RBP18.43■□□□□ 0.54
CRLF3-201ENST00000324238 HMGB4Q8WW32 186 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 PRSS27Q9BQR3 290 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 CD93Q9NPY3 652 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 KCNE5Q9UJ90 142 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 ZMIZ1Q9ULJ6 1067 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TP53BP1Q12888 1972 aaPredicted RBP18.43■□□□□ 0.54
CRLF3-201ENST00000324238 UNC119BA6NIH7 251 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 CACNB4O00305 520 aaPredicted RBP18.43■□□□□ 0.54
CRLF3-201ENST00000324238 IMPA2O14732 288 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 KLF4O43474 513 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 RFPL3O75679 317 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 MT-ND4P03905 459 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 TNK1Q13470 666 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 PDGFRLQ15198 375 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 GXYLT1Q4G148 440 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 SMUG1Q53HV7 270 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 MFSD12Q6NUT3 480 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 PRSS41Q7RTY9 318 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 RAB42Q8N4Z0 105 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 OR5M3Q8NGP4 307 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 OR52N1Q8NH53 320 aa18.43■□□□□ 0.54
CRLF3-201ENST00000324238 ZC3HAV1LQ96H79 300 aaKnown RBP18.43■□□□□ 0.54
CRLF3-201ENST00000324238 SERPINI2O75830 405 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 EXOSC7Q15024 291 aaKnown RBP18.42■□□□□ 0.54
CRLF3-201ENST00000324238 MEPCEQ7L2J0 689 aaKnown RBP18.42■□□□□ 0.54
CRLF3-201ENST00000324238 OR8H3Q8N146 312 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 C9orf62Q8N4C0 152 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 ZNF655Q8N720 491 aaPredicted RBP18.42■□□□□ 0.54
CRLF3-201ENST00000324238 CYSLTR2Q9NS75 346 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 A0A1W2PQU0 124 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 CDHR4A6H8M9 788 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 LRRC72A6NJI9 287 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 H3BSH0 61 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 SYT5O00445 386 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 HNRNPA1P09651 372 aaKnown RBP eCLIP18.42■□□□□ 0.54
CRLF3-201ENST00000324238 ENPP1P22413 925 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 HSD17B2P37059 387 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 CRMP1Q14194 572 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 TMEM35AQ53FP2 167 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 PLA1AQ53H76 456 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 MRPL2Q5T653 305 aaKnown RBP18.42■□□□□ 0.54
CRLF3-201ENST00000324238 PRPF38BQ5VTL8 546 aaKnown RBP18.42■□□□□ 0.54
CRLF3-201ENST00000324238 ZAR1Q86SH2 424 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 PLCZ1Q86YW0 608 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 ABHD4Q8TB40 342 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 SGK494L7N484 410 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 PPP1R3DO95685 299 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 CRYZL1O95825 349 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 BMP7P18075 431 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 PKLRP30613 574 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 PITPNBP48739 271 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 ATP12AP54707 1039 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 ERVK-21P61565 698 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 TRA2BP62995 288 aaKnown RBP18.42■□□□□ 0.54
CRLF3-201ENST00000324238 ZSWIM7Q19AV6 140 aa18.42■□□□□ 0.54
CRLF3-201ENST00000324238 HBMQ6B0K9 141 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms