RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 TMEM120AQ9BXJ8 343 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 SLC38A1Q9H2H9 487 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 RABEP2Q9H5N1 569 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 ZNF385DQ9H6B1 395 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 RUBCNLQ9H714 662 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 TMEM185BQ9H7F4 350 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 NPDC1Q9NQX5 325 aaPredicted RBP16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 TMEM45AQ9NWC5 275 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 SLC25A37Q9NYZ2 338 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 TRIM33Q9UPN9 1127 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 L3MBTL1Q9Y468 752 aa16.19■□□□□ 0.18
SNRPA1-201ENST00000254193 CLDN24A6NM45 220 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 CLIC1O00299 241 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 HNRNPRO43390 633 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 EIF4E2O60573 245 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 TGM6O95932 706 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 UBTFL6P0CB48 400 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 TROVE2P10155 538 aaKnown RBP eCLIP16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 COX6B1P14854 86 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 HOXB9P17482 250 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 IL11P20809 199 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 MAGEA8P43361 318 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 EEFSECP57772 596 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 FOXF2Q12947 444 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 SLC25A35Q3KQZ1 300 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 CGB2Q6NT52 195 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 POMZP3Q6PJE2 187 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 LRRC74BQ6ZQY2 392 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 GGNQ86UU5 652 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 MSRB3Q8IXL7 192 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 FBXO27Q8NI29 283 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 FIG4Q92562 907 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 ZNF845Q96IR2 970 aaPredicted RBP16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 TM9SF2Q99805 663 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 THUMPD3Q9BV44 507 aaKnown RBP16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 LAT2Q9GZY6 243 aa16.18■□□□□ 0.18
SNRPA1-201ENST00000254193 EIF1AYO14602 144 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 DVL2O14641 736 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 EFNA2O43921 213 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 CTSSP25774 331 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 EIF1P41567 113 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 DSTNP60981 165 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 FGFBP1Q14512 234 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 LRIF1Q5T3J3 769 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 GCNT2Q8N0V5 402 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 RELL2Q8NC24 303 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 TOR1AIP2Q8NFQ8 470 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 SLC38A5Q8WUX1 472 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 INTS12Q96CB8 462 aaKnown RBP16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 PINK1Q9BXM7 581 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 MTHFD2LQ9H903 347 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 P2RX2Q9UBL9 471 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 ZNF629Q9UEG4 869 aaPredicted RBP16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 UNC79Q9P2D8 2635 aa16.17■□□□□ 0.18
SNRPA1-201ENST00000254193 A0A1W2PP18 115 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 AGAP5A6NIR3 686 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 SLC22A20A6NK97 555 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 RCBTB2O95199 551 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 BCHEP06276 602 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 NUDT7P0C024 238 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 TFPTP0C1Z6 253 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 TMIGD3P0DMS9 266 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 PRF1P14222 555 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 PRKCAP17252 672 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 SHC1P29353 583 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 PGM1P36871 562 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 MDH1P40925 334 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 RAC1P63000 192 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 KCNJ10P78508 379 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 PLAURQ03405 335 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 CBFBQ13951 182 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 QPRTQ15274 297 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 RGNQ15493 299 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 METTL21CQ5VZV1 264 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 MEX3BQ6ZN04 569 aaKnown RBP16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 P4HA3Q7Z4N8 544 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 METTL25Q8N6Q8 603 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 FAM71CQ8NEG0 241 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 OIT3Q8WWZ8 545 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 SPOCK3Q9BQ16 436 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 ENKD1Q9H0I2 346 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 CCDC134Q9H6E4 229 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 VAPAQ9P0L0 249 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 STOML1Q9UBI4 398 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 SLC35A3Q9Y2D2 325 aa16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 GPC6Q9Y625 555 aaPredicted RBP16.16■□□□□ 0.18
SNRPA1-201ENST00000254193 FREM3P0C091 2139 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 A0A0J9YW62 118 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 DNAJA2O60884 412 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 NTN1O95631 604 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 ME2P23368 584 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 RYKP34925 604 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 SFTPDP35247 375 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 EIF1AXP47813 144 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 ARFIP2P53365 341 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 RPS3AP61247 264 aaKnown RBP16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 PON3Q15166 354 aa16.15■□□□□ 0.18
SNRPA1-201ENST00000254193 SGCBQ16585 318 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms