RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ZNF223Q9UK11 482 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 PILRAQ9UKJ1 303 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ENTPD2Q9Y5L3 495 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CSNK1G3Q9Y6M4 447 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 MPDZO75970 2070 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 LINC00854A0A1B0GVQ3 168 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 A0A1W2PQF6 199 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 MEIOCA2RUB1 952 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 FAM221BA6H8Z2 402 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 OR6C74A6NCV1 312 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 LRRC72A6NJI9 287 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 J3QRE1 110 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 CDC42EP2O14613 210 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 NARSO43776 548 aaKnown RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 IDH3BO43837 385 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 SLC19A2O60779 497 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 LYPD3O95274 346 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 SLC2A10O95528 541 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 GPR75O95800 540 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 HLA-DQB1P01920 261 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 ATP1B1P05026 303 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 IFI30P13284 250 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 POLR2CP19387 275 aaPredicted RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 CD53P19397 219 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 NT5EP21589 574 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 HTR2AP28223 471 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 NR4A2P43354 598 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 MTNR1BP49286 362 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 RNF144AP50876 292 aaPredicted RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 SRP54P61011 504 aaKnown RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 POU6F2P78424 691 aaPredicted RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 RIN1Q13671 783 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 QPRTQ15274 297 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 SHHQ15465 462 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 OR1Q1Q15612 314 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 RAB30Q15771 203 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 ZFP69Q49AA0 526 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 TRMT12Q53H54 448 aaKnown RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 MANEAQ5SRI9 462 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 CCNJQ5T5M9 372 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 MRPL2Q5T653 305 aaKnown RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 MZT2BQ6NZ67 158 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 PLBD1Q6P4A8 553 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 CNIH2Q6PI25 160 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 MEPCEQ7L2J0 689 aaKnown RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 LNX2Q8N448 690 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 SIRT6Q8N6T7 355 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 C19orf18Q8NEA5 215 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 OR10G6Q8NH81 332 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 ENKURQ8TC29 256 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 TMEM239Q8WW34 195 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 CAPSLQ8WWF8 208 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 RNF166Q96A37 237 aaPredicted RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 OTULINQ96BN8 352 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 ATF6BQ99941 703 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 SOSTQ9BQB4 213 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 PRSS27Q9BQR3 290 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 RPP25Q9BUL9 199 aaKnown RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 DPH1Q9BZG8 443 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 TMEM168Q9H0V1 697 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 C11orf54Q9H0W9 315 aaPredicted RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 TSPAN10Q9H1Z9 355 aaPredicted RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 CMC2Q9NRP2 79 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 SIDT1Q9NXL6 827 aaKnown RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 COMMD3Q9UBI1 195 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 MSRAQ9UJ68 235 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 BAIAP2Q9UQB8 552 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 YBX2Q9Y2T7 364 aaKnown RBP7.49□□□□□ -1.21
GPC3-204ENST00000631057 MED31Q9Y3C7 131 aa7.49□□□□□ -1.21
GPC3-204ENST00000631057 HEATR5AQ86XA9 2040 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 TRBV23OR9-2A0A075B6M9 112 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 LOC105369274A0A096LPK9 316 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 LOC102723532A0A0G2JNH3 316 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 CENPVL1A0A0U1RR11 272 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 SMIM30A4D0T7 59 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 CDHR4A6H8M9 788 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 FAM172BPA6NC97 362 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 ZNF860A6NHJ4 632 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 SLC22A31A6NKX4 558 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 RIIAD1A6NNX1 92 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 C12orf71A8MTZ7 269 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 C2orf74A8MZ97 194 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 H0YGG7 62 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 GTPBP1O00178 669 aaKnown RBP7.48□□□□□ -1.21
GPC3-204ENST00000631057 BHLHE40O14503 412 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 RGS13O14921 159 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 RNF13O43567 381 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 HPGDSO60760 199 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 ZGLP1P0C6A0 271 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 GKN3PP0CG01 181 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 PRKAR1AP10644 381 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 SLC2A2P11168 524 aaPredicted RBP7.48□□□□□ -1.21
GPC3-204ENST00000631057 PRG2P13727 222 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 MAKP20794 623 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 MYL9P24844 172 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 AKT2P31751 481 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 BMP8BP34820 402 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 MAP2K3P46734 347 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 CAPZA2P47755 286 aa7.48□□□□□ -1.21
GPC3-204ENST00000631057 EVX1P49640 407 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms