RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SDHAF3Q9NRP4 125 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 OLAHQ9NV23 265 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 ADPRHL2Q9NX46 363 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 RPS6KA6Q9UK32 745 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 KLF13Q9Y2Y9 288 aaPredicted RBP18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 NINQ8N4C6 2090 aa18.12■□□□□ 0.49
PDLIM2-221ENST00000622702 EML6Q6ZMW3 1958 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 CDHR4A6H8M9 788 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 CLDN24A6NM45 220 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 TTLL8A6PVC2 850 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 SYT5O00445 386 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 TPST1O60507 370 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 C8BP07358 591 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 SELENOWP63302 87 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 PLAURQ03405 335 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 C17orf67Q0P5P2 114 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 FLOT2Q14254 428 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF169Q14929 603 aaPredicted RBP18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 EIPR1Q53HC9 387 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF766Q5HY98 468 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 CYP2R1Q6VVX0 501 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 SPPL2CQ8IUH8 684 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 GRAMD2AQ8IUY3 354 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 GATSQ8NAP1 163 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 TMEM178AQ8NBL3 297 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 GPR32P1Q8NGA4 272 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 PHOSPHO1Q8TCT1 267 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 HES7Q9BYE0 225 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 DEPPQ9NTK1 212 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 BAG5Q9UL15 447 aa18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 SAMD4AQ9UPU9 718 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-221ENST00000622702 IGLV3-32A0A0A0MS00 114 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 CIB2O75838 187 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 EPPINO95925 133 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 CSTAP01040 98 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 UBL4AP11441 157 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 MLLT10P55197 1068 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 CLIP4Q8N3C7 705 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 LZICQ8WZA0 190 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 POP5Q969H6 163 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 SLC35B4Q969S0 331 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 TMEM41AQ96HV5 264 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 FAM173AQ9BQD7 235 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 KLHL1Q9NR64 748 aa18.1■□□□□ 0.49
PDLIM2-221ENST00000622702 A0A0G2JMM0 328 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 A0A1W2PPB8 328 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 A0A1W2PRS3 328 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 AQP12BA6NM10 295 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 KIR3DP1A8MWS1 328 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF264O43296 627 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 EIF4E2O60573 245 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 TRIM3O75382 744 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 LGI1O95970 557 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 FESP07332 822 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 RNF144AP50876 292 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 GLIPR1L2Q4G1C9 344 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 C1orf146Q5VVC0 180 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF771Q7L3S4 317 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 GALNTL5Q7Z4T8 443 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 PACS2Q86VP3 889 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 COMTD1Q86VU5 262 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 AQP12AQ8IXF9 295 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 DUSP19Q8WTR2 217 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 CNOT9Q92600 299 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 LRGUKQ96M69 825 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 EVA1AQ9H8M9 152 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 EXOSC3Q9NQT5 275 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 RLIMQ9NVW2 624 aa18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 DNAJB12Q9NXW2 375 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-221ENST00000622702 TCRBV5S2A0A599 114 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 G3V3Y1 287 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 KLRC4-KLRK1H3BQV0 150 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 GTPBP1O00178 669 aaKnown RBP18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 SNPHO15079 494 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 PEX1O43933 1283 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 BCAS1O75363 584 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 ZNF682O95780 498 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 DNASE1L1P49184 302 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 TLE1Q04724 770 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 FOXO1Q12778 655 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 SKP2Q13309 424 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 SULF2Q8IWU5 870 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 WDSUB1Q8N9V3 476 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 TOR1AIP2Q8NFQ8 470 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 OR2M7Q8NG81 312 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 PROX1Q92786 737 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 LAT2Q9GZY6 243 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 KLHL28Q9NXS3 571 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 PPP4R1LQ9P1A2 415 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 SLC13A4Q9UKG4 626 aa18.08■□□□□ 0.49
PDLIM2-221ENST00000622702 C2orf72A6NCS6 295 aa18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 C17orf51A8MQB3 221 aa18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 OIP5O43482 229 aa18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 HCRTR2O43614 444 aa18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 UBTFL6P0CB48 400 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 ELAVL4P26378 380 aaKnown RBP18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 MSX1P28360 303 aa18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 GPR85P60893 370 aa18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 ZNF117Q03924 483 aa18.07■□□□□ 0.48
PDLIM2-221ENST00000622702 TIGD3Q6B0B8 471 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms