RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 BCKDKO14874 412 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 FTH1P19P0C7X4 201 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 CYP4B1P13584 511 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 TCN2P20062 427 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 HTR2AP28223 471 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 ABCD3P28288 659 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 IFNGR2P38484 337 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 TPD52P55327 224 aaPredicted RBP16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 PCOLCEQ15113 449 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 C3orf38Q5JPI3 329 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 FAM69BQ5VUD6 431 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 PGBD2Q6P3X8 592 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 THAP5Q7Z6K1 395 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 OR4K5Q8NGD3 323 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 GTPBP3Q969Y2 492 aaKnown RBP16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 UCK2Q9BZX2 261 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 TRIM2Q9C040 744 aa16.24■□□□□ 0.19
SHKBP1-224ENST00000600718 A0A087WUU8 490 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 IGHV1-45A0A0A0MS14 117 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 E9PQ18 207 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 THY1P04216 161 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 NGFRP08138 427 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 POU2F1P14859 743 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 MMP11P24347 488 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 ACAA2P42765 397 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 CLK3P49761 638 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 UGT2B15P54855 530 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 EXT1Q16394 746 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 FNDC7Q5VTL7 733 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF691Q5VV52 312 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF613Q6PF04 617 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 RRM2BQ7LG56 351 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 ESX1Q8N693 406 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 CT55Q8WUE5 264 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 ACOT11Q8WXI4 607 aaPredicted RBP16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 FLRT3Q9NZU0 649 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 NDRG4Q9ULP0 352 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 FARSAQ9Y285 508 aaKnown RBP16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 HS3ST3B1Q9Y662 390 aa16.23■□□□□ 0.19
SHKBP1-224ENST00000600718 MYO15AQ9UKN7 3530 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 SPAARA0A1B0GVQ0 90 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 PROB1E7EW31 1015 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 H3BNH8 94 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 CSRP1P21291 193 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 RYKP34925 604 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 RANBP1P43487 201 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 RPP38P78345 283 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 COX10Q12887 443 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 TARDBPQ13148 414 aaKnown RBP eCLIP16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 C1orf94Q6P1W5 598 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 TTC33Q6PID6 262 aaPredicted RBP16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF730Q6ZMV8 503 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 SETD9Q8NE22 299 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 ZNF696Q9H7X3 374 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 LIN28AQ9H9Z2 209 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 PTTG2Q9NZH5 202 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 FOXJ2Q9P0K8 574 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 SLC7A7Q9UM01 511 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 GMPPBQ9Y5P6 360 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 NPFFR2Q9Y5X5 522 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 HSPE1-MOB4S4R3N1 261 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 A0A1W2PQ72 361 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 OR6C70A6NIJ9 312 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 ICOSLGO75144 302 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 NAGAP17050 411 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 ENDOUP21128 410 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 ESRRGP62508 458 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 KLHL17Q6TDP4 642 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 CD300LDQ6UXZ3 194 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 ZER1Q7Z7L7 766 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 NKAIN4Q8IVV8 208 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 AMER2Q8N7J2 671 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 LSMEM1Q8N8F7 131 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 FAM71CQ8NEG0 241 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 ELP5Q8TE02 316 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 DGCR14Q96DF8 476 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 IMMP1LQ96LU5 166 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 PITX2Q99697 317 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 APOL4Q9BPW4 351 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 YTHDF1Q9BYJ9 559 aaKnown RBP16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 TCFL5Q9UL49 500 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 MYRFQ9Y2G1 1151 aa16.22■□□□□ 0.19
SHKBP1-224ENST00000600718 KIF26BQ2KJY2 2108 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 NINQ8N4C6 2090 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 A0A1W2PQD3 144 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 TMEM200CA6NKL6 621 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 GTPBP1O00178 669 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 TNFSF15O95150 251 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 COX6A1P12074 109 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 RPS15P62841 145 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 EFR3AQ14156 821 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 SSPNQ14714 243 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 BTBD16Q32M84 506 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 TMPRSS12Q86WS5 348 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 M1APQ8TC57 530 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 PHOSPHO1Q8TCT1 267 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 GNPDA2Q8TDQ7 276 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 HRASLS5Q96KN8 279 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 DEFB126Q9BYW3 111 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 FAM117AQ9C073 453 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms