RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 GCM2O75603 506 aaPredicted RBP15.43■□□□□ 0.06
RETREG3-210ENST00000590541 PSMG1O95456 288 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 TUBBP07437 444 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 MAPK1P28482 360 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 SRSF2Q01130 221 aaKnown RBP15.43■□□□□ 0.06
RETREG3-210ENST00000590541 ZNF155Q12901 538 aaPredicted RBP15.43■□□□□ 0.06
RETREG3-210ENST00000590541 TSC22D1Q15714 1073 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 DECR1Q16698 335 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 ARL13AQ5H913 290 aaPredicted RBP15.43■□□□□ 0.06
RETREG3-210ENST00000590541 MFSD12Q6NUT3 480 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 TMEM107Q6UX40 140 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 LRIG3Q6UXM1 1119 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 R3HCC1LQ7Z5L2 792 aaKnown RBP15.43■□□□□ 0.06
RETREG3-210ENST00000590541 STEAP2Q8NFT2 490 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 OR10D3Q8NH80 312 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 DUSP19Q8WTR2 217 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 ADGRG7Q96K78 797 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 EGLN2Q96KS0 407 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 PPP3R2Q96LZ3 170 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 KCNK17Q96T54 332 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 RHNO1Q9BSD3 238 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 REEP4Q9H6H4 257 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 ESRP2Q9H6T0 727 aaKnown RBP15.43■□□□□ 0.06
RETREG3-210ENST00000590541 C12orf49Q9H741 205 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 HHATLQ9HCP6 504 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 Q9N2J8 555 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 SLC17A7Q9P2U7 560 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 ABCG2Q9UNQ0 655 aa15.43■□□□□ 0.06
RETREG3-210ENST00000590541 LSM1O15116 133 aaKnown RBP15.42■□□□□ 0.06
RETREG3-210ENST00000590541 PDPK1O15530 556 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 SSX4O60224 188 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 LINC00032P0C843 101 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 THBS2P35442 1172 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 RPL3P39023 403 aaKnown RBP15.42■□□□□ 0.06
RETREG3-210ENST00000590541 TAB1Q15750 504 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 UGT3A2Q3SY77 523 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 VPS26BQ4G0F5 336 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 RFTN2Q52LD8 501 aaPredicted RBP15.42■□□□□ 0.06
RETREG3-210ENST00000590541 FIGNL1Q6PIW4 674 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 SEZ6L2Q6UXD5 910 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 MARCH3Q86UD3 253 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 STK32CQ86UX6 486 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 DDIASQ8IXT1 998 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 OR10H5Q8NGA6 315 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 CEP70Q8NHQ1 597 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 TWIST2Q8WVJ9 160 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 PPCDCQ96CD2 204 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 TNFRSF13CQ96RJ3 184 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 TRIM2Q9C040 744 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 GRIP2Q9C0E4 1043 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 TUBB1Q9H4B7 451 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 GLRX2Q9NS18 164 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 ACSS1Q9NUB1 689 aaPredicted RBP15.42■□□□□ 0.06
RETREG3-210ENST00000590541 FIS1Q9Y3D6 152 aa15.42■□□□□ 0.06
RETREG3-210ENST00000590541 SVEP1Q4LDE5 3571 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 WIPF1O43516 503 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 SPAG7O75391 227 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 CHRNGP07510 517 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 SDC1P18827 310 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 AGTR1P30556 359 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 FRKP42685 505 aaPredicted RBP15.41■□□□□ 0.06
RETREG3-210ENST00000590541 CLK3P49761 638 aaKnown RBP15.41■□□□□ 0.06
RETREG3-210ENST00000590541 RPL38P63173 70 aaKnown RBP15.41■□□□□ 0.06
RETREG3-210ENST00000590541 VLDLRP98155 873 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 PDE7AQ13946 482 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 PRSS53Q2L4Q9 553 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 GALNT10Q86SR1 603 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 CROCCP2Q86T23 111 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 DTX2Q86UW9 622 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 GABRG1Q8N1C3 465 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 ZNF619Q8N2I2 560 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 NATD1Q8N6N6 113 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 OR2T11Q8NH01 316 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 LMF2Q9BU23 707 aaKnown RBP15.41■□□□□ 0.06
RETREG3-210ENST00000590541 MECRQ9BV79 373 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 SSU72Q9NP77 194 aaKnown RBP15.41■□□□□ 0.06
RETREG3-210ENST00000590541 FBXO34Q9NWN3 711 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 FAM120CQ9NX05 1096 aaKnown RBP15.41■□□□□ 0.06
RETREG3-210ENST00000590541 NTMQ9P121 344 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 MCTS1Q9ULC4 181 aaKnown RBP15.41■□□□□ 0.06
RETREG3-210ENST00000590541 B3GALT5Q9Y2C3 310 aa15.41■□□□□ 0.06
RETREG3-210ENST00000590541 IGLV3-32A0A0A0MS00 114 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 FAM234BA2RU67 622 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 DPRXA6NFQ7 191 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 TYROBPO43914 113 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 CXCL13O43927 109 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 GMFGO60234 142 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 SNUPNO95149 360 aaKnown RBP15.4■□□□□ 0.06
RETREG3-210ENST00000590541 NTN1O95631 604 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 IL33O95760 270 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 BPGMP07738 259 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 PRPS2P11908 318 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 ADH6P28332 368 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 GPC1P35052 558 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 MANFP55145 182 aaKnown RBP15.4■□□□□ 0.06
RETREG3-210ENST00000590541 CASP9P55211 416 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 BSPH1Q075Z2 132 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 LOXL1Q08397 574 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-210ENST00000590541 GALNTL6Q49A17 601 aa15.4■□□□□ 0.06
RETREG3-210ENST00000590541 SH2D4BQ5SQS7 431 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms