RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 CPSF4O95639 269 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 PLGP00747 810 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 ALDOCP09972 364 aaKnown RBP11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 FCGR2AP12318 317 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 H2AFXP16104 143 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 MATN1P21941 496 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 EPHA3P29320 983 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 IST1P53990 364 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 CASP9P55211 416 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 C21orf58P58505 322 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 DAZAP2Q15038 168 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 POU4F3Q15319 338 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 HDXQ7Z353 690 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 C6orf120Q7Z4R8 191 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 CAMKMTQ7Z624 323 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 BTLAQ7Z6A9 289 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 GTPBP8Q8N3Z3 284 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 TMCO5AQ8N6Q1 288 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 METTL25Q8N6Q8 603 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 OR10D3Q8NH80 312 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 RFWD2Q8NHY2 731 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 RAB3IL1Q8TBN0 382 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 ACTRT2Q8TDY3 377 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 ATP6V1G3Q96LB4 118 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 KLHDC3Q9BQ90 382 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 RNF122Q9H9V4 155 aa11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 CCM2LQ9NUG4 571 aaPredicted RBP11.42□□□□□ -0.58
NPLOC4-213ENST00000573519 INTS1Q8N201 2190 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 RNASET2O00584 256 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 TNFSF11O14788 317 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 CASKO14936 926 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 ANKRD28O15084 1053 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 CXCL13O43927 109 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 AQP8O94778 261 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 SYNGR4O95473 234 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 KIR2DL2P43627 348 aaPredicted RBP11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 CCR4P51679 360 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 ATP12AP54707 1039 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 RAC1P63000 192 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 PHC1P78364 1004 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 FAM27E3Q08E93 113 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 FOXF1Q12946 379 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 TESK1Q15569 626 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 GPR68Q15743 365 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 NDUFAF6Q330K2 333 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 SLC9B1Q4ZJI4 515 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 KLHL26Q53HC5 615 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 ANXA8L1Q5VT79 327 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 HBMQ6B0K9 141 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 NXNQ6DKJ4 435 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 CBLN3Q6UW01 205 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 C16orf62Q7Z3J2 963 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 MAVSQ7Z434 540 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 MTERF4Q7Z6M4 381 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 VPS37AQ8NEZ2 397 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 POC1BQ8TC44 478 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 MARK4Q96L34 752 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 TEX37Q96LM6 180 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 ARGLU1Q9NWB6 273 aaPredicted RBP11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 NDRG3Q9UGV2 375 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 ST6GALNAC2Q9UJ37 374 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 MCTS1Q9ULC4 181 aaKnown RBP11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 CLEC4AQ9UMR7 237 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 EDARQ9UNE0 448 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 PROCRQ9UNN8 238 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 PLEKHA6Q9Y2H5 1048 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 AKAP9Q99996 3911 aa11.41□□□□□ -0.58
NPLOC4-213ENST00000573519 MED12Q93074 2177 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 FAM221AA4D161 298 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 C7orf72A4D263 438 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 DUXAA6NLW8 204 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 TRPC5OSA6NMA1 111 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 OIP5O43482 229 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 CYP7B1O75881 506 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 LINGO3P0C6S8 592 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 POU2F1P14859 743 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 CD1EP15812 388 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 IL11P20809 199 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 DNASE1P24855 282 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 PSMA4P25789 261 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 IL12AP29459 219 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 SFTPDP35247 375 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 CHI3L1P36222 383 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 SLC6A8P48029 635 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 P2RX1P51575 399 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 CLNS1AP54105 237 aaKnown RBP11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 CTBP2P56545 445 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 UFM1P61960 85 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 FGFBP1Q14512 234 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 EXOC3L2Q2M3D2 409 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 SPANXN4Q5MJ08 99 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 PDSS1Q5T2R2 415 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 PDZK1Q5T2W1 519 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 OGFOD2Q6N063 350 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 FAM214BQ7L5A3 538 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 OLIG3Q7RTU3 272 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 LILRA2Q8N149 483 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 GOLGA6L1Q8N7Z2 621 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 ZNF610Q8N9Z0 462 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms