RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 TIAF1O95411 115 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 GUSBP08236 651 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 GSTM3P21266 225 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 ACVR2AP27037 513 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 GPR4P46093 362 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 GIPRP48546 466 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 MLLT10P55197 1068 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 SNRPGP62308 76 aaKnown RBP8.69□□□□□ -1.02
LINC00838-201ENST00000562956 CDK5Q00535 292 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 TSPAN31Q12999 210 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 BIKQ13323 160 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 GINS1Q14691 196 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 KCNJ8Q15842 424 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 LPAL2Q16609 132 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 TRIM61Q5EBN2 209 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 ACSM5Q6NUN0 579 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 CASP12Q6UXS9 341 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 MBOAT2Q6ZWT7 520 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 SLC38A9Q8NBW4 561 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 OR4D9Q8NGE8 314 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 OR8D4Q8NGM9 314 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 OR4C3Q8NH37 302 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 RORBQ92753 470 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 OR6C1Q96RD1 312 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 FUNDC2Q9BWH2 189 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 OR8D2Q9GZM6 311 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 LRRN3Q9H3W5 708 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 SLC22A11Q9NSA0 550 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 CLN6Q9NWW5 311 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 DNAJB12Q9NXW2 375 aaKnown RBP8.69□□□□□ -1.02
LINC00838-201ENST00000562956 TVP23BQ9NYZ1 205 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 CTSFQ9UBX1 484 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 WARS2Q9UGM6 360 aaKnown RBP8.69□□□□□ -1.02
LINC00838-201ENST00000562956 RP1P56715 2156 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 TCRBV16S1A1N1A0A5B0 115 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 NPIPB9F8W1W9 429 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 KLF4O43474 513 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 PRKYO43930 277 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 DDAH2O95865 285 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 CDK1P06493 297 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 STSP08842 583 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 ADRA2AP08913 450 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 ANKRD34CP0C6C1 535 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 TMBIM6P55061 237 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 NSDHLQ15738 373 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF141Q15928 474 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 YOD1Q5VVQ6 348 aaPredicted RBP8.68□□□□□ -1.02
LINC00838-201ENST00000562956 PRR23CQ6ZRP0 262 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 IGFN1Q86VF2 1251 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 SVOPQ8N4V2 548 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 TCEANCQ8N8B7 351 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 DTWD2Q8NBA8 298 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 OR7G1Q8NGA0 311 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 MYDGFQ969H8 173 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 G6PC3Q9BUM1 346 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 VN1R1Q9GZP7 353 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 DNAJC27Q9NZQ0 273 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 PRODH2Q9UF12 536 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 TESQ9UGI8 421 aaKnown RBP8.68□□□□□ -1.02
LINC00838-201ENST00000562956 MKL2Q9ULH7 1088 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 CLCA3PQ9Y6N3 262 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 M0R296 226 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 CDC42EP2O14613 210 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 YKT6O15498 198 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 FMO6PO60774 539 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 NOL3O60936 208 aaKnown RBP8.68□□□□□ -1.02
LINC00838-201ENST00000562956 IGKV3-11P04433 115 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 LCKP06239 509 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 FPR3P25089 353 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 ACAA2P42765 397 aaKnown RBP8.68□□□□□ -1.02
LINC00838-201ENST00000562956 ST3GAL4Q11206 333 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 SYT6Q5T7P8 510 aaPredicted RBP8.68□□□□□ -1.02
LINC00838-201ENST00000562956 RHBDD2Q6NTF9 364 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 SHISA6Q6ZSJ9 500 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 RASSF6Q6ZTQ3 369 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 COX15Q7KZN9 410 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 AMER2Q8N7J2 671 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 POGLUT1Q8NBL1 392 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 PFN4Q8NHR9 129 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 IFI44Q8TCB0 444 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 SLC2A12Q8TD20 617 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF721Q8TF20 911 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 EFHD2Q96C19 240 aaPredicted RBP8.68□□□□□ -1.02
LINC00838-201ENST00000562956 CCDC74BQ96LY2 380 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 SMOC1Q9H4F8 434 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 FLRT3Q9NZU0 649 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 UNC13CQ8NB66 2214 aa8.68□□□□□ -1.02
LINC00838-201ENST00000562956 SH3D21A4FU49 640 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ARHGAP33O14559 1287 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TLX2O43763 284 aaPredicted RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 PSMB9P28065 219 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ATP12AP54707 1039 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 TPTEP56180 551 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 OCA2Q04671 838 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 ELAVL1Q15717 326 aaKnown RBP8.67□□□□□ -1.02
LINC00838-201ENST00000562956 NDUFAF6Q330K2 333 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SMUG1Q53HV7 270 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 CLEC12AQ5QGZ9 265 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 SLC16A12Q6ZSM3 486 aa8.67□□□□□ -1.02
LINC00838-201ENST00000562956 GRAMD2AQ8IUY3 354 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms