RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 ANXA7P20073 488 aaKnown RBP11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 ATP5A1P25705 553 aaKnown RBP11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 NTSP30990 170 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 THBS2P35442 1172 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 RAG2P55895 527 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 RAP2BP61225 183 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 TMEM115Q12893 351 aaPredicted RBP11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 NKAIN4Q8IVV8 208 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 CLRN3Q8NCR9 226 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 BCL7CQ8WUZ0 217 aaPredicted RBP11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 CA10Q9NS85 328 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 MARK1Q9P0L2 795 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 SLC25A13Q9UJS0 675 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 ICKQ9UPZ9 632 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 ASF1AQ9Y294 204 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 NTNG1Q9Y2I2 539 aa11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 PCDHGA9Q9Y5G4 932 aaKnown RBP11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 TP53BP1Q12888 1972 aaPredicted RBP11.99□□□□□ -0.49
SFSWAP-209ENST00000540469 CARNS1A5YM72 827 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 B4GALT2O60909 372 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 C1orf105O95561 183 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 POP4O95707 220 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 LDOC1O95751 146 aaPredicted RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 STATHP02808 62 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 ERVK-25P63136 954 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 EFNB1P98172 346 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 STX4Q12846 297 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 ELAVL2Q12926 359 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 CAMK1Q14012 370 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 ATRAIDQ6UW56 229 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 TFAP2EQ6VUC0 442 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 GID4Q8IVV7 300 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 OR9A1PQ8NGU1 263 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 SUN3Q8TAQ9 357 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 C19orf43Q9BQ61 176 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 TRMT61BQ9BVS5 477 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 HELZP42694 1942 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 PIP5K1CO60331 668 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 GLAP06280 429 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 ATF1P18846 271 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 RIPPLY1Q0D2K3 151 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 HLXQ14774 488 aaPredicted RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 ELP2Q6IA86 826 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 GSG1LQ6UXU4 331 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 NHLRC1Q6VVB1 395 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 METTL3Q86U44 580 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 TMEM173Q86WV6 379 aaPredicted RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 VRK2Q86Y07 508 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 SLC44A3Q8N4M1 653 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 BVESQ8NE79 360 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 OR8K3Q8NH51 312 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 LGALS14Q8TCE9 139 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 C2orf15Q8WU43 125 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 THAP4Q8WY91 577 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 TM4SF18Q96CE8 201 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 LRRC46Q96FV0 321 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 TAS2R3Q9NYW6 316 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 GPR160Q9UJ42 338 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 TRPM7Q96QT4 1865 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 PRAMEF27A3QJZ7 478 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 AIPO00170 330 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 PI15O43692 258 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 IGHA1P01876 353 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 CHRM4P08173 479 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 SSR2P43308 183 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 GMFBP60983 142 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 MORN1Q5T089 497 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 PRPF38BQ5VTL8 546 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 FCRLBQ6BAA4 426 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 LRRTM4Q86VH4 590 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 CMTM8Q8IZV2 173 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 BOLLQ8N9W6 283 aaKnown RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 C17orf47Q8NEP4 570 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 OR51Q1Q8NH59 317 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 C1orf216Q8TAB5 229 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 GHSRQ92847 366 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 MCHR1Q99705 422 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 NPAS1Q99742 590 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 HMX1Q9NP08 348 aaPredicted RBP11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 TAS2R10Q9NYW0 307 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 CAMK2AQ9UQM7 478 aa11.98□□□□□ -0.49
SFSWAP-209ENST00000540469 FEZF1A0PJY2 475 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 ZNF98A6NK75 572 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 MCRIP1C9JLW8 97 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 NOS3P29474 1203 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 STARP49675 285 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 CCR9P51686 369 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 ACSM1Q08AH1 577 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 FAM69AQ5T7M9 428 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 HES5Q5TA89 166 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 KHDRBS2Q5VWX1 349 aaKnown RBP11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 C18orf63Q68DL7 685 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 LRRN1Q6UXK5 716 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 TMUB2Q71RG4 321 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 C17orf64Q86WR6 236 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 GJD3Q8N144 294 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 BMPERQ8N8U9 685 aa11.97□□□□□ -0.49
SFSWAP-209ENST00000540469 RELL2Q8NC24 303 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms