RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 COQ7Q99807 217 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 LXNQ9BS40 222 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 C5orf66Q9H5L9 145 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 TFB2MQ9H5Q4 396 aaKnown RBP4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 DCLRE1BQ9H816 532 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 COG4Q9H9E3 785 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SOHLH2Q9NX45 425 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 EPHA6Q9UF33 1036 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SUN2Q9UH99 717 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SELENOKQ9Y6D0 94 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SCN1AP35498 2009 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 RYR1P21817 5038 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 NCOA6Q14686 2063 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 A0A087WZY1 265 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 A0A1B0GWJ7 208 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 A8MVM7 634 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 C16orf97H3BN30 126 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 MCF2LO15068 1137 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 ARHGEF9O43307 516 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 MFN2O95140 757 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 IL1BP01584 269 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 EPOP01588 193 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 AADACP22760 399 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 CTNNA2P26232 953 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 GAS1P54826 345 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 GEMP55040 296 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 DSCR9P59020 149 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 HMGN5P82970 282 aaKnown RBP4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 DMTNQ08495 405 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 HSPA14Q0VDF9 509 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 TRDNQ13061 729 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 CDH18Q13634 790 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 CEACAM7Q14002 265 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 PDIA5Q14554 519 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 IMMTQ16891 758 aaKnown RBP4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 GPR33Q49SQ1 333 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 XKR4Q5GH76 650 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 DDI2Q5TDH0 399 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 DHRS11Q6UWP2 260 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 FAM159AQ6UWV7 190 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 TMEM207Q6UWW9 146 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 CEACAM20Q6UY09 585 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 RFPL4BQ6ZWI9 263 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 C17orf64Q86WR6 236 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 TBC1D21Q8IYX1 336 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 KLHDC1Q8N7A1 406 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 TRPV3Q8NET8 790 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 DMBX1Q8NFW5 382 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR6C4Q8NGE1 309 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 CA5BP1Q8WTZ4 195 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 UBTD2Q8WUN7 234 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 WBP2Q969T9 261 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 ESAMQ96AP7 390 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZMYND19Q96E35 227 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 GPR137Q96N19 417 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 TXN2Q99757 166 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 ASCL2Q99929 193 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 TPPP3Q9BW30 176 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 GLT8D2Q9H1C3 349 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 RAB9BQ9NP90 201 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 FARSBQ9NSD9 589 aaKnown RBP4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 BARHL2Q9NY43 387 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 PLEK2Q9NYT0 353 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 ARMCX1Q9P291 453 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 ERVK-18Q9QC07 812 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 UBQLN1Q9UMX0 589 aaKnown RBP4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 FAF1Q9UNN5 650 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 MGAT4BQ9UQ53 548 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 PIKFYVEQ9Y2I7 2098 aa4.12□□□□□ -1.75
HMGB1P23-201ENST00000518743 USF3Q68DE3 2245 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 TRPM6Q9BX84 2022 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 IGHV4-61A0A0C4DH41 118 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 PLSCR5A0PG75 271 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 LACTBL1A8MY62 500 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 LMO7DNF2Z398 122 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 KIF5CO60282 957 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 SHOX2O60902 331 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 DIRAS3O95661 229 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 CPNE6O95741 557 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 AK1P00568 194 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 IGHV4-59P01825 116 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 ATP1A1P05023 1023 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 CHRNGP07510 517 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 PLEKP08567 350 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 CXCL8P10145 99 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 HNRNPA2B1P22626 353 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 NAMPTP43490 491 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 B3GALT5-AS1P59052 145 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 NANOS3P60323 173 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 SRSF9Q13242 221 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 FZD2Q14332 565 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 TMEM132DQ14C87 1099 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 SPHARQ15513 63 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 WSCD2Q2TBF2 565 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 CHRFAM7AQ494W8 412 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 LRRC23Q53EV4 343 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 MPPE1Q53F39 396 aa4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 CWC27Q6UX04 472 aaKnown RBP4.11□□□□□ -1.75
HMGB1P23-201ENST00000518743 TMEM110Q86TL2 294 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms