RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 PNPLA3Q9NST1 481 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 GID8Q9NWU2 228 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 ARMCX1Q9P291 453 aa13.61□□□□□ -0.23
RNF4-210ENST00000508235 ERRFI1Q9UJM3 462 aaPredicted RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 RPH3AQ9Y2J0 694 aaPredicted RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 RP1L1Q8IWN7 2480 aaPredicted RBP13.61□□□□□ -0.23
RNF4-210ENST00000508235 LOC100653049A0A140TA62 436 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 C17orf51A8MQB3 221 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 B4DXG7 233 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 GMFGO60234 142 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 KRT34O76011 436 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 NUDT14O95848 222 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 IL7RP16871 459 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 ZNF17P17021 662 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 ACVR2AP27037 513 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 EIF1P41567 113 aaKnown RBP13.6□□□□□ -0.23
RNF4-210ENST00000508235 KCNJ10P78508 379 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 ZNF117Q03924 483 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 CBFBQ13951 182 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 ZSWIM7Q19AV6 140 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 REP15Q6BDI9 236 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 RPTNQ6XPR3 784 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 TMCO5AQ8N6Q1 288 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 BBS10Q8TAM1 723 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 LRRC58Q96CX6 371 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 TMEM19Q96HH6 336 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 TREX2Q9BQ50 279 aaPredicted RBP13.6□□□□□ -0.23
RNF4-210ENST00000508235 PRDM14Q9GZV8 571 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 LAT2Q9GZY6 243 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 ARMC7Q9H6L4 198 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 KCNE5Q9UJ90 142 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 ICAM5Q9UMF0 924 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 ZNF232Q9UNY5 417 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 CARD8Q9Y2G2 431 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 ARL2BPQ9Y2Y0 163 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 L3MBTL1Q9Y468 752 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 DSPPQ9NZW4 1301 aa13.6□□□□□ -0.23
RNF4-210ENST00000508235 PHF3Q92576 2039 aaKnown RBP13.59□□□□□ -0.23
RNF4-210ENST00000508235 C7orf72A4D263 438 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 ZNHIT1O43257 154 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 ARAFP10398 606 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 PEPDP12955 493 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 NID1P14543 1247 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 CPN1P15169 458 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 RPS4Y1P22090 263 aaKnown RBP13.59□□□□□ -0.23
RNF4-210ENST00000508235 SLC6A2P23975 617 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 SMSP52788 366 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 SRSF1Q07955 248 aaKnown RBP eCLIP13.59□□□□□ -0.233e-6■■■■□ 22.2
RNF4-210ENST00000508235 LARS2Q15031 903 aaKnown RBP13.59□□□□□ -0.23
RNF4-210ENST00000508235 MAPK14Q16539 360 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 BCL2A1Q16548 175 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 LIN52Q52LA3 116 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 EMC4Q5J8M3 183 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 REEP3Q6NUK4 255 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 ARSKQ6UWY0 536 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 OLIG3Q7RTU3 272 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 PIGWQ7Z7B1 504 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 KRT73Q86Y46 540 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 OR8J3Q8NGG0 315 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 OR5M9Q8NGP3 310 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 OR5W2Q8NH69 310 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 WDR60Q8WVS4 1066 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 CMTM5Q96DZ9 223 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 ARSGQ96EG1 525 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 CCDC106Q9BWC9 280 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 TMEM38AQ9H6F2 299 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 RUBCNLQ9H714 662 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 BCL2L10Q9HD36 194 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 EXOSC3Q9NQT5 275 aaKnown RBP13.59□□□□□ -0.23
RNF4-210ENST00000508235 MED17Q9NVC6 651 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 ALKBH4Q9NXW9 302 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 TNFRSF10DQ9UBN6 386 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 CAMK2AQ9UQM7 478 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 VDAC3Q9Y277 283 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 IFT52Q9Y366 437 aa13.59□□□□□ -0.23
RNF4-210ENST00000508235 GPC6Q9Y625 555 aaPredicted RBP13.59□□□□□ -0.23
RNF4-210ENST00000508235 WIPF3A6NGB9 483 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 CYP7B1O75881 506 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 DCTN3O75935 186 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 FAM107AO95990 144 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 LDLRP01130 860 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 THBS1P07996 1170 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 NUDT7P0C024 238 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 UBTFL6P0CB48 400 aaPredicted RBP13.58□□□□□ -0.24
RNF4-210ENST00000508235 ETS2P15036 469 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 PGCP20142 388 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 TCEA1P23193 301 aaKnown RBP13.58□□□□□ -0.24
RNF4-210ENST00000508235 ADH6P28332 368 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 PGM1P36871 562 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 SLC6A8P48029 635 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 CCR4P51679 360 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 EEFSECP57772 596 aaKnown RBP13.58□□□□□ -0.24
RNF4-210ENST00000508235 B3GALT5-AS1P59052 145 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 CDK6Q00534 326 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 RBBP4Q09028 425 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 SKP2Q13309 424 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 MAPK11Q15759 364 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 CYP51A1Q16850 503 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 PLPPR5Q32ZL2 321 aa13.58□□□□□ -0.24
RNF4-210ENST00000508235 C1orf185Q5T7R7 199 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms