RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	CLDN15	P56746	228 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	EEFSEC	P57772	596 aa	Known RBP	12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	LRRC74A	Q0VAA2	488 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	FOXF2	Q12947	444 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	PDZK1	Q5T2W1	519 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	PPP4R4	Q6NUP7	873 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	POMZP3	Q6PJE2	187 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CBLN3	Q6UW01	205 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	MTERF4	Q7Z6M4	381 aa	Known RBP	12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ADGRE4P	Q86SQ3	457 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZNF295-AS1	Q8N0V1	137 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	GCNT2	Q8N0V5	402 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	MIER2	Q8N344	545 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TMCO5A	Q8N6Q1	288 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	PNPT1	Q8TCS8	783 aa	Known RBP	12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CKAP2	Q8WWK9	683 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	WNT2B	Q93097	391 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	RNF145	Q96MT1	663 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	PINK1	Q9BXM7	581 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TRIM8	Q9BZR9	551 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	SDR39U1	Q9NRG7	319 aa	Predicted RBP	12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CLCF1	Q9UBD9	225 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	AP4B1	Q9Y6B7	739 aa		12.76	□□□□□ -0.37
CCHCR1-222	ENST00000507459	SLC22A20	A6NK97	555 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	EEF1E1-BLOC1S5	C9J1V9	151 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	EEF1E1	O43324	174 aa	Known RBP	12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CYP7B1	O75881	506 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	RCBTB2	O95199	551 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ANP32D	O95626	131 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	OPRM1	P35372	400 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	P2RX1	P51575	399 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CCR4	P51679	360 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	DLX5	P56178	289 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	RPS3A	P61247	264 aa	Known RBP	12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	STX1B	P61266	288 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ITPR2	Q14571	2701 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	SGCB	Q16585	318 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TMEM44	Q2T9K0	475 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	PLPPR5	Q32ZL2	321 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TIGD2	Q4W5G0	525 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	GPAT3	Q53EU6	434 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	HEPHL1	Q6MZM0	1159 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	HMGN2P46	Q86SG4	172 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ACBD4	Q8NC06	268 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	FIG4	Q92562	907 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	VPS33A	Q96AX1	596 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZBTB8A	Q96BR9	441 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ROPN1L	Q96C74	230 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	THOC1	Q96FV9	657 aa	Known RBP	12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZNF845	Q96IR2	970 aa	Predicted RBP	12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	MAGEB18	Q96M61	343 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	UCN2	Q96RP3	112 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	NMUR2	Q9GZQ4	415 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TMEM185B	Q9H7F4	350 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	RMND5A	Q9H871	391 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	STOML1	Q9UBI4	398 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	KCNE5	Q9UJ90	142 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	WDR45	Q9Y484	360 aa		12.75	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CENPVL1	A0A0U1RR11	272 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	SERINC4	A6NH21	518 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	HMGN4	O00479	90 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	EIF1AY	O14602	144 aa	Known RBP	12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZNF264	O43296	627 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	UGT2B17	O75795	530 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	UBL4A	P11441	157 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZNF17	P17021	662 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	IGFBP2	P18065	325 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	EIF1AX	P47813	144 aa	Known RBP	12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ASCL1	P50553	236 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	HPCA	P84074	193 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	FUT5	Q11128	374 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	MYBPH	Q13203	477 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TOMM34	Q15785	309 aa	Predicted RBP	12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	COX20	Q5RI15	118 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	C6orf10	Q5SRN2	563 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	TYW3	Q6IPR3	259 aa	Known RBP	12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	POC1B	Q8TC44	478 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ARSG	Q96EG1	525 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	LRRC46	Q96FV0	321 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ITCH	Q96J02	903 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZFP3	Q96NJ6	502 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ZNF350	Q9GZX5	532 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ACBD3	Q9H3P7	528 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	SLC6A13	Q9NSD5	602 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ICAM5	Q9UMF0	924 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	MED12L	Q86YW9	2145 aa		12.74	□□□□□ -0.37
CCHCR1-222	ENST00000507459	FAM234B	A2RU67	622 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	PRAMEF27	A3QJZ7	478 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	SYT5	O00445	386 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	H6PD	O95479	791 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	KRT75	O95678	551 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	IL18BP	O95998	194 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	CSTA	P01040	98 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	LINGO3	P0C6S8	592 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	IL11	P20809	199 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	ME2	P23368	584 aa		12.73	□□□□□ -0.37
CCHCR1-222	ENST00000507459	PSMA4	P25789	261 aa	Known RBP	12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms