RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 GPR37O15354 613 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 UGDHO60701 494 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 CLN5O75503 358 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 NDUFB6O95139 128 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 AGTR1P30556 359 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 MNDAP41218 407 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ARFIP1P53367 373 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 RAE1P78406 368 aaKnown RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 LIPJQ5W064 366 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 OR7E24Q6IFN5 339 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 FBXL22Q6P050 247 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 SERPINA9Q86WD7 417 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 NKAIN4Q8IVV8 208 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 OR4K1Q8NGD4 311 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 SLC25A28Q96A46 364 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ECHDC3Q96DC8 303 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF354BQ96LW1 612 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 WDR77Q9BQA1 342 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 SEC11CQ9BY50 192 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ALX4Q9H161 411 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 OPA3Q9H6K4 179 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 MRPL15Q9P015 296 aaKnown RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF219Q9P2Y4 722 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 PCDHGA5Q9Y5G8 931 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 NUDT19A8MXV4 375 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 UBXN7O94888 489 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ATP1B1P05026 303 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 MUC1P15941 1255 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 CR2P20023 1033 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ACHEP22303 614 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 IGFBP6P24592 240 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 CSF2RBP32927 897 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 PGFP49763 221 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 SLC3A1Q07837 685 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 CHIT1Q13231 466 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 PON3Q15166 354 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ZXDCQ2QGD7 858 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 LINC00303Q3SY05 128 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF385BQ569K4 471 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 AADACL4Q5VUY2 407 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 OR2W3Q7Z3T1 314 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 PXKQ7Z7A4 578 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 SPATA2LQ8IUW3 424 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-206ENST00000476391 ARL6IP6Q8N6S5 226 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 TEX19Q8NA77 164 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 OR4K5Q8NGD3 323 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 TCTEX1D2Q8WW35 142 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 RAB7BQ96AH8 199 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 TRIM36Q9NQ86 728 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 IL17CQ9P0M4 197 aa12.91□□□□□ -0.34
HDAC1-206ENST00000476391 OR14I1A6ND48 311 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 ABCD3P28288 659 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 NPBWR1P48145 328 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 TBX4P57082 545 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 CDC42EP1Q00587 391 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 FABP9Q0Z7S8 132 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 TNFAIP1Q13829 316 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 RAB33AQ14088 237 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 UAP1L1Q3KQV9 507 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 FAM27D1Q5T7N8 215 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 MTFR2Q6P444 385 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 SSX9Q7RTT3 188 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 DNAAF1Q8NEP3 725 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 OR2AK2Q8NG84 335 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 OR1S2Q8NGQ3 325 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 BOCQ9BWV1 1114 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 PLA2G12AQ9BZM1 189 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 TLNRD1Q9H1K6 362 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 REEP4Q9H6H4 257 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 BRF2Q9HAW0 419 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 KLHL1Q9NR64 748 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 KLHL9Q9P2J3 617 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 OR10H1Q9Y4A9 318 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 PRSS21Q9Y6M0 314 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 CHD5Q8TDI0 1954 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 LRIT2A6NDA9 550 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 ANHXE9PGG2 379 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 GPR37L1O60883 481 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 KRT33AO76009 404 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 OAZ2O95190 189 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 ACP5P13686 325 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF44P15621 663 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 BDKRB2P30411 391 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 HTR1FP30939 366 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 ATP6V1E1P36543 226 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 RGRP47804 291 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 CXADRP78310 365 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 CAP1Q01518 475 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 C18orf63Q68DL7 685 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 CEACAM19Q7Z692 300 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 TECPR1Q7Z6L1 1165 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 FBXO16Q8IX29 292 aaPredicted RBP12.9□□□□□ -0.34
HDAC1-206ENST00000476391 ZNF561Q8N587 486 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 SCLYQ96I15 445 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 TMEM68Q96MH6 324 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 ISG20L2Q9H9L3 353 aaKnown RBP12.9□□□□□ -0.34
HDAC1-206ENST00000476391 A4GNTQ9UNA3 340 aa12.9□□□□□ -0.34
HDAC1-206ENST00000476391 SLC22A14Q9Y267 594 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms