RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 NAP1L1P55209 391 aaKnown RBP5.53□□□□□ -1.52
HDAC3-206ENST00000471968 PRPS1P60891 318 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 NAAAQ02083 359 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 POU3F1Q03052 451 aaPredicted RBP5.53□□□□□ -1.52
HDAC3-206ENST00000471968 HGFACQ04756 655 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 PAX8Q06710 450 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 SP140Q13342 867 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 ADPRMQ3LIE5 342 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 TTLL9Q3SXZ7 439 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 TBRG1Q3YBR2 411 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 C18orf63Q68DL7 685 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 KLHL24Q6TFL4 600 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 C1orf122Q6ZSJ8 110 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 RAPH1Q70E73 1250 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 APTXQ7Z2E3 356 aaKnown RBP5.53□□□□□ -1.52
HDAC3-206ENST00000471968 NDUFA11Q86Y39 141 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 SBSPONQ8IVN8 264 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 SLC43A2Q8N370 569 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 C17orf78Q8N4C9 275 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 RNF10Q8N5U6 811 aaKnown RBP5.53□□□□□ -1.52
HDAC3-206ENST00000471968 OTUD6BQ8N6M0 293 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 OR8K1Q8NGG5 319 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 GIMAP7Q8NHV1 300 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 P3H4Q92791 437 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 SLC35A4Q96G79 324 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 C16orf58Q96GQ5 468 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 VPS39Q96JC1 886 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 KLHL15Q96M94 604 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 KCNC2Q96PR1 638 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 F2RL3Q96RI0 385 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 EHD1Q9H4M9 534 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 EDA2RQ9HAV5 297 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 SLC7A10Q9NS82 523 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 FBLN5Q9UBX5 448 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 CRYL1Q9Y2S2 319 aa5.53□□□□□ -1.52
HDAC3-206ENST00000471968 OR6C65A6NJZ3 312 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 GLOD5A6NK44 160 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 ADARB2-AS1A8MUL3 147 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 TRIM49D1C9J1S8 452 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 CLDN25C9JDP6 229 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 H3BMM5 538 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 CST8O60676 142 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 FBXO24O75426 580 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 PROSCO94903 275 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 HSP90AA1P07900 732 aaKnown RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 SLC35E2BP0CK96 405 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 PPIAL4GP0DN37 164 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 VSIG10L2P0DP72 767 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 NT5EP21589 574 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 HIST1H1TP22492 207 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 ATP5A1P25705 553 aaKnown RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 SHC1P29353 583 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 IL12BP29460 328 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 HPDP32754 393 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 EVI2BP34910 448 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 MAGEB1P43366 347 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 CLCN7P51798 805 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 EFNB2P52799 333 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 PCBP3P57721 371 aaKnown RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 TGM3Q08188 693 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 EFR3AQ14156 821 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 MAD2L1BPQ15013 274 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 ASTE1Q2TB18 679 aaPredicted RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 GLIPR1L2Q4G1C9 344 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 DUPD1Q68J44 220 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 NHLRC1Q6VVB1 395 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 LARP4Q71RC2 724 aaKnown RBP eCLIP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 GALNT5Q7Z7M9 940 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 GAS2L3Q86XJ1 694 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 LILRA2Q8N149 483 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 PAPD5Q8NDF8 572 aaKnown RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 TTLQ8NG68 377 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 OR7G1Q8NGA0 311 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 OR56A3Q8NH54 315 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 UHMK1Q8TAS1 419 aaKnown RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 DUSP19Q8WTR2 217 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 RNF138Q8WVD3 245 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 LPGAT1Q92604 370 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 TFAP2CQ92754 450 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 RAB1CQ92928 201 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 TIMD4Q96H15 378 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 RNF145Q96MT1 663 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 CDK15Q96Q40 435 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 ATOH8Q96SQ7 321 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 RHOXF2Q9BQY4 288 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 MRPL37Q9BZE1 423 aaKnown RBP5.52□□□□□ -1.53
HDAC3-206ENST00000471968 RTN4RQ9BZR6 473 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 ROGDIQ9GZN7 287 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 SEC61A2Q9H9S3 476 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 TAB2Q9NYJ8 693 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 BCAP29Q9UHQ4 241 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 ABCG2Q9UNQ0 655 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 DYRK1BQ9Y463 629 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 USH1CQ9Y6N9 552 aa5.52□□□□□ -1.53
HDAC3-206ENST00000471968 ANKDD1BA6NHY2 528 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 HACD1B0YJ81 288 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 H7C0C1 242 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 TSPAN2O60636 221 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 LHBP01229 141 aa5.51□□□□□ -1.53
HDAC3-206ENST00000471968 PF4P02776 101 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms