RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 PCDHA13Q9Y5I0 950 aa4.65□□□□□ -1.67
EPHA3-202ENST00000452448 PNPLA7Q6ZV29 1317 aa4.65□□□□□ -1.67
EPHA3-202ENST00000452448 UBR2Q8IWV8 1755 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 A0A087WZ62 844 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CCDC187A0A096LP49 1063 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 A0A096LPI6 279 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CDC14CA4D256 554 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 TUBAL3A6NHL2 446 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 A8MXK9 166 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SHISA8B8ZZ34 492 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DLGAP1O14490 977 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SLC16A4O15374 487 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 KLK10O43240 276 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 GRID2O43424 1007 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 KIAA0513O60268 411 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CLDN9O95484 217 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CRYBA1P05813 215 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SLC35E2BP0CK96 405 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SLC35E2P0CK97 266 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 PGAM1P18669 254 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CYP7A1P22680 504 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 COILP38432 576 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 IRF9Q00978 393 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 NEDD8Q15843 81 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 UGT8Q16880 541 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DPY19L1Q2PZI1 675 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DEFB115Q30KQ5 88 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DCAF12L1Q5VU92 463 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 PRAMEF8Q5VWM4 474 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 PRAMEF7Q5VXH5 474 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 NXNL2Q5VZ03 156 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SLC39A4Q6P5W5 647 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 ZNF517Q6ZMY9 492 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 APTXQ7Z2E3 356 aaKnown RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CLNKQ7Z7G1 428 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CLEC10AQ8IUN9 316 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 ZNF100Q8IYN0 542 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CFAP206Q8IYR0 622 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 BATF2Q8N1L9 274 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 STPG2Q8N412 459 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 ARHGEF39Q8N4T4 335 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 TMEM156Q8N614 296 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 RNF148Q8N7C7 305 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 RAB2BQ8WUD1 216 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DAZLQ92904 295 aaKnown RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 PSMG2Q969U7 264 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CREB3L1Q96BA8 519 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 EID2BQ96D98 161 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 WBP1Q96G27 269 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 POM121L2Q96KW2 1035 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 MAGEB18Q96M61 343 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 GPR137Q96N19 417 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 PHB2Q99623 299 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DPH2Q9BQC3 489 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 AIF1LQ9BQI0 150 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SLC30A2Q9BRI3 323 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 FDXACB1Q9BRP7 624 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 ZNF426Q9BUY5 554 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 C1QTNF6Q9BXI9 259 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 BEX2Q9BXY8 128 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DCSTAMPQ9H295 470 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 MTHFD2LQ9H903 347 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 FN3KRPQ9HA64 309 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SLCO3A1Q9UIG8 710 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 KLHL21Q9UJP4 597 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 NENFQ9UMX5 172 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CDYLQ9Y232 598 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SF3B1O75533 1304 aaKnown RBP eCLIP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 MYH6P13533 1939 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 MYH4Q9Y623 1939 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 TMEM265A0A087WTH1 108 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SLC35F4A4IF30 521 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 TRDCB7Z8K6 153 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SCDO00767 359 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 AZIN1O14977 448 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DNPH1O43598 174 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 PRKAB2O43741 272 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CLEC3AO75596 197 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CNIH1O95406 144 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 IFNA5P01569 189 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 RPN2P04844 631 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SPARCP09486 303 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 HOXC6P09630 235 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 GABRA1P14867 456 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 SLC6A6P31641 620 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 OTX1P32242 354 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CASRP41180 1078 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 HLCSP50747 726 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 BLKP51451 505 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DNA2P51530 1060 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 ADARB1P78563 741 aaKnown RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 MAD2L1Q13257 205 aaPredicted RBP4.64□□□□□ -1.67
EPHA3-202ENST00000452448 KRT33BQ14525 404 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 RPE65Q16518 533 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 IFI44LQ53G44 452 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 PYY3Q5JQD4 70 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 TMEM201Q5SNT2 666 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 DNLZQ5SXM8 178 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 CRTC3Q6UUV7 619 aa4.64□□□□□ -1.67
EPHA3-202ENST00000452448 ZNF562Q6V9R5 426 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms