RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SERPINA11Q86U17 422 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 OR7G3Q8NG95 312 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 OR1J4Q8NGS1 313 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 DUSP19Q8WTR2 217 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 SETD7Q8WTS6 366 aaKnown RBP11.34□□□□□ -0.59
UBR4-205ENST00000417040 OLAHQ9NV23 265 aa11.34□□□□□ -0.59
UBR4-205ENST00000417040 GGT3PA6NGU5 568 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 ACOT7O00154 380 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 DVL2O14641 736 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 SIX6O95475 246 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 CLEC2LP0C7M8 214 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 SGPP2Q8IWX5 399 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 UBE2FQ969M7 185 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 DNTTIP1Q9H147 329 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 GLS2Q9UI32 602 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 BTNL2Q9UIR0 455 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 TSPAN11A1L157 253 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 CCDC85CA6NKD9 419 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 TTLL8A6PVC2 850 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 SGK494L7N484 410 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 NR2C1P13056 603 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 FUT1P19526 365 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 IL4RP24394 825 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 AFF3P51826 1226 aaKnown RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 RPS21P63220 83 aaKnown RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 LTBQ06643 244 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 BORAQ6PGQ7 559 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 LIPIQ6XZB0 460 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 LRRTM3Q86VH5 581 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 ARHGAP12Q8IWW6 846 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 POC1BQ8TC44 478 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 TCEAL2Q9H3H9 227 aaPredicted RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 CLMPQ9H6B4 373 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 PLCXD1Q9NUJ7 323 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 V9GY05 133 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 CSO75390 466 aaKnown RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 WDR5P61964 334 aaKnown RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 ZNF169Q14929 603 aaPredicted RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 IFNL1Q8IU54 200 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 C11orf84Q9BUA3 381 aaPredicted RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 C11orf54Q9H0W9 315 aaPredicted RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 TLR9Q9NR96 1032 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 PGAP2Q9UHJ9 254 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 PCDHGA2Q9Y5H1 932 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 TOR1AO14656 332 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 ENDOUP21128 410 aaKnown RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 SFTPDP35247 375 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 HMGCLP35914 325 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 PLP2Q04941 152 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 DLX2Q07687 328 aaPredicted RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 OPCMLQ14982 345 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 EXOSC7Q15024 291 aaKnown RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 MANEALQ5VSG8 457 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 KDELC1Q6UW63 502 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 AMIGO3Q86WK7 504 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 HORMAD2Q8N7B1 307 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 SFXN5Q8TD22 340 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 OR5M11Q96RB7 305 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 SUCNR1Q9BXA5 334 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 IL26Q9NPH9 171 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 A0A1W2PQU0 124 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 SOCS6O14544 535 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 F2P00734 622 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 RBMS1P29558 406 aaKnown RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 BDH1Q02338 343 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 SYPL1Q16563 259 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 AGAP7PQ5VUJ5 663 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 C12orf45Q8N5I9 185 aaPredicted RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 SIMC1Q8NDZ2 872 aa11.33□□□□□ -0.6
UBR4-205ENST00000417040 FOXRED1Q96CU9 486 aaPredicted RBP11.33□□□□□ -0.6
UBR4-205ENST00000417040 PUS1Q9Y606 427 aaKnown RBP eCLIP11.33□□□□□ -0.6
UBR4-205ENST00000417040 TSTD3H0UI37 97 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 SYNGR4O95473 234 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 SOD2P04179 222 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 KLK3P07288 261 aaPredicted RBP11.32□□□□□ -0.6
UBR4-205ENST00000417040 PSMB5P28074 263 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 NKX3-2P78367 333 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 RAB40BQ12829 278 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 CNKSR3Q6P9H4 555 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 MAMDC4Q6UXC1 1216 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 LSMEM2Q8N112 164 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 RCBTB1Q8NDN9 531 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 GPR174Q9BXC1 333 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 SLC6A16Q9GZN6 736 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 PHYHO14832 338 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 SERPINA2P20848 420 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 TGFBR1P36897 503 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 PIGAP37287 484 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 RAB5CP51148 216 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 CXADRP78310 365 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 HTD2P86397 168 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 ILKQ13418 452 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 DCST2Q5T1A1 773 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 PXDC1Q5TGL8 231 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 MEPCEQ7L2J0 689 aaKnown RBP11.32□□□□□ -0.6
UBR4-205ENST00000417040 WDSUB1Q8N9V3 476 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 GPR26Q8NDV2 337 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 TMEM40Q8WWA1 233 aa11.32□□□□□ -0.6
UBR4-205ENST00000417040 DVL3Q92997 716 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms