RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 KCNJ10P78508 379 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 RBBP4Q09028 425 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 GANABQ14697 944 aaKnown RBP17.44■□□□□ 0.38
HOXA9-202ENST00000396345 KRT72Q14CN4 511 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 NDUFAF6Q330K2 333 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 CBLN3Q6UW01 205 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 NET1Q7Z628 596 aaPredicted RBP17.44■□□□□ 0.38
HOXA9-202ENST00000396345 FGD2Q7Z6J4 655 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 ARPINQ7Z6K5 226 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 CHERPQ8IWX8 916 aaKnown RBP17.44■□□□□ 0.38
HOXA9-202ENST00000396345 C11orf65Q8NCR3 313 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 HIPK4Q8NE63 616 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 OR52P1PQ8NH57 321 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 GPATCH1Q9BRR8 931 aaKnown RBP17.44■□□□□ 0.38
HOXA9-202ENST00000396345 SPATA9Q9BWV2 254 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 LAT2Q9GZY6 243 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 PIF1Q9H611 641 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 SLC35A3Q9Y2D2 325 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 SLC6A5Q9Y345 797 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 ESPL1Q14674 2120 aa17.44■□□□□ 0.38
HOXA9-202ENST00000396345 HELZ2Q9BYK8 2649 aaKnown RBP17.43■□□□□ 0.38
HOXA9-202ENST00000396345 CYP7B1O75881 506 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 ETS2P15036 469 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 ABOP16442 354 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 TCEA1P23193 301 aaKnown RBP17.43■□□□□ 0.38
HOXA9-202ENST00000396345 GCKP35557 465 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 GZMMP51124 257 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 P2RX1P51575 399 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 GTF3C1Q12789 2109 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 EIF2S3LQ2VIR3 472 aaKnown RBP17.43■□□□□ 0.38
HOXA9-202ENST00000396345 CMIPQ8IY22 773 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 ZZZ3Q8IYH5 903 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 TMCO5AQ8N6Q1 288 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 SPRR3Q9UBC9 169 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF232Q9UNY5 417 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 OSGIN2Q9Y236 505 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 ANGPT4Q9Y264 503 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 AP3M1Q9Y2T2 418 aa17.43■□□□□ 0.38
HOXA9-202ENST00000396345 POLEQ07864 2286 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 A0A087WZY1 265 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 OR14I1A6ND48 311 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 CLDN24A6NM45 220 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 FAM47E-STBD1D6RA91 191 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 NPIPA2E9PIF3 369 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 NPIPA3F8WFD2 350 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 SLC19A2O60779 497 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 UBTFL6P0CB48 400 aaPredicted RBP17.42■□□□□ 0.38
HOXA9-202ENST00000396345 NID1P14543 1247 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 PGM1P36871 562 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 SKP2Q13309 424 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 LARS2Q15031 903 aaKnown RBP17.42■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.42■□□□□ 0.38
HOXA9-202ENST00000396345 LIN52Q52LA3 116 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 C8orf82Q6P1X6 216 aaPredicted RBP17.42■□□□□ 0.38
HOXA9-202ENST00000396345 ARSKQ6UWY0 536 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 IFNEQ86WN2 208 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 CALHM3Q86XJ0 350 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 VRK2Q86Y07 508 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 KRT73Q86Y46 540 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 PRR7Q8TB68 274 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 SARAFQ96BY9 339 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 CMTM6Q9NX76 183 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 ICAM5Q9UMF0 924 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 RPH3AQ9Y2J0 694 aaPredicted RBP17.42■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF835Q9Y2P0 537 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 IFT52Q9Y366 437 aa17.42■□□□□ 0.38
HOXA9-202ENST00000396345 WISP1O95388 367 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 NUDT14O95848 222 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 THBS1P07996 1170 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 PCGF2P35227 344 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 CCR4P51679 360 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF41P51814 821 aaPredicted RBP17.41■□□□□ 0.38
HOXA9-202ENST00000396345 SUMO3P55854 103 aaPredicted RBP17.41■□□□□ 0.38
HOXA9-202ENST00000396345 PSME3P61289 254 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 GLYR1Q49A26 553 aaPredicted RBP17.41■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF311Q5JNZ3 666 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF836Q6ZNA1 936 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 SLC30A8Q8IWU4 369 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 SLC15A3Q8IY34 581 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 FAM71CQ8NEG0 241 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 TOR1AIP2Q8NFQ8 470 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 OR5W2Q8NH69 310 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 FAM57AQ8TBR7 257 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 GPR119Q8TDV5 335 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 REXO5Q96IC2 774 aaKnown RBP17.41■□□□□ 0.38
HOXA9-202ENST00000396345 NSL1Q96IY1 281 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 SFXN2Q96NB2 322 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF583Q96ND8 569 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF607Q96SK3 696 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 KLHDC3Q9BQ90 382 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 SPATA5L1Q9BVQ7 753 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 MED17Q9NVC6 651 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 TNFRSF10DQ9UBN6 386 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 ACAD8Q9UKU7 415 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 VDAC3Q9Y277 283 aa17.41■□□□□ 0.38
HOXA9-202ENST00000396345 ZNF443Q9Y2A4 671 aaPredicted RBP17.41■□□□□ 0.38
HOXA9-202ENST00000396345 GPC6Q9Y625 555 aaPredicted RBP17.41■□□□□ 0.38
HOXA9-202ENST00000396345 UBR5O95071 2799 aaPredicted RBP17.4■□□□□ 0.38
HOXA9-202ENST00000396345 CCT8L1PA6NM43 557 aa17.4■□□□□ 0.38
HOXA9-202ENST00000396345 BCKDKO14874 412 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms