RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 ZNF781Q8N8C0 355 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 GATSQ8NAP1 163 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 OR8J2Q8NGG1 315 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 OR10D3Q8NH80 312 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 NUDT8Q8WV74 236 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 OTUB1Q96FW1 271 aaPredicted RBP15.92■□□□□ 0.14
HDDC3-201ENST00000330334 CHMP6Q96FZ7 201 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 RNF145Q96MT1 663 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 WFIKKN1Q96NZ8 548 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 OPN3Q9H1Y3 402 aaPredicted RBP15.92■□□□□ 0.14
HDDC3-201ENST00000330334 AKTIPQ9H8T0 292 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 ZNF226Q9NYT6 803 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 MCTS1Q9ULC4 181 aaKnown RBP15.92■□□□□ 0.14
HDDC3-201ENST00000330334 NF1P21359 2839 aa15.92■□□□□ 0.14
HDDC3-201ENST00000330334 C16orf97H3BN30 126 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 RNASET2O00584 256 aaKnown RBP15.91■□□□□ 0.14
HDDC3-201ENST00000330334 SS18L1O75177 396 aaPredicted RBP15.91■□□□□ 0.14
HDDC3-201ENST00000330334 CD99P14209 185 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 POU2F1P14859 743 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 ELK4P28324 431 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 RPL14P50914 215 aaKnown RBP15.91■□□□□ 0.14
HDDC3-201ENST00000330334 KEAP1Q14145 624 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 PDSS1Q5T2R2 415 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 AP1ARQ63HQ0 302 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 GTF2IRD2BQ6EKJ0 949 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 GTF2IRD2Q86UP8 949 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 ZNF610Q8N9Z0 462 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 OR6K3Q8NGY3 331 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 OR2V1Q8NHB1 315 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 POC1BQ8TC44 478 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 PHOSPHO1Q8TCT1 267 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 SH3YL1Q96HL8 342 aaPredicted RBP15.91■□□□□ 0.14
HDDC3-201ENST00000330334 PKNOX2Q96KN3 472 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 NPAS1Q99742 590 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 PRRG4Q9BZD6 226 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 C20orf27Q9GZN8 174 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.91■□□□□ 0.14
HDDC3-201ENST00000330334 ICAM5Q9UMF0 924 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 PROCRQ9UNN8 238 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 EMC9Q9Y3B6 208 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 DTNAQ9Y4J8 743 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 KCNE3Q9Y6H6 103 aa15.91■□□□□ 0.14
HDDC3-201ENST00000330334 V9GYY5 206 aaPredicted RBP15.91■□□□□ 0.14
HDDC3-201ENST00000330334 NUP214P35658 2090 aaPredicted RBP15.9■□□□□ 0.14
HDDC3-201ENST00000330334 WDR91A4D1P6 747 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 CFLARO15519 480 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 AK1P00568 194 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 GUSBP08236 651 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 SLC6A8P48029 635 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 P2RX1P51575 399 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 SIRPAP78324 504 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 ZNF117Q03924 483 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 DEFB113Q30KQ7 82 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 PGS1Q32NB8 556 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 LILRA2Q8N149 483 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 MIPOL1Q8TD10 442 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 OR7D2Q96RA2 312 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 SDF2Q99470 211 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 NMUR2Q9GZQ4 415 aa15.9■□□□□ 0.14
HDDC3-201ENST00000330334 ZNF395Q9H8N7 513 aaPredicted RBP15.9■□□□□ 0.14
HDDC3-201ENST00000330334 GPC6Q9Y625 555 aaPredicted RBP15.9■□□□□ 0.14
HDDC3-201ENST00000330334 ZNF469Q96JG9 3925 aaPredicted RBP15.89■□□□□ 0.13
HDDC3-201ENST00000330334 A0A0J9YW62 118 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 A0A1W2PPR1 153 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 GJE1A6NN92 205 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 EIF4E2O60573 245 aaKnown RBP15.89■□□□□ 0.13
HDDC3-201ENST00000330334 SYNGR4O95473 234 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 PABPC4LP0CB38 370 aaKnown RBP15.89■□□□□ 0.13
HDDC3-201ENST00000330334 NID1P14543 1247 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 CRYGSP22914 178 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 SLC1A6P48664 564 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 CARD18P57730 90 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 MPP2Q14168 576 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 PDCD2Q16342 344 aaPredicted RBP15.89■□□□□ 0.13
HDDC3-201ENST00000330334 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.89■□□□□ 0.13
HDDC3-201ENST00000330334 HBMQ6B0K9 141 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 CBLN3Q6UW01 205 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 C6orf120Q7Z4R8 191 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 TOR1AIP2Q8NFQ8 470 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 GPR119Q8TDV5 335 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 OIT3Q8WWZ8 545 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 OSTF1Q92882 214 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 TESCQ96BS2 214 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 ARSGQ96EG1 525 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 KLHL15Q96M94 604 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 SORT1Q99523 831 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 KLHDC3Q9BQ90 382 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 MED18Q9BUE0 208 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 TIGARQ9NQ88 270 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 PCDHGB4Q9UN71 923 aa15.89■□□□□ 0.13
HDDC3-201ENST00000330334 PRSS51A0A1B0GVH4 220 aa15.88■□□□□ 0.13
HDDC3-201ENST00000330334 DEFB108AA8MXU0 73 aa15.88■□□□□ 0.13
HDDC3-201ENST00000330334 GTPBP1O00178 669 aaKnown RBP15.88■□□□□ 0.13
HDDC3-201ENST00000330334 ETV2O00321 342 aaPredicted RBP15.88■□□□□ 0.13
HDDC3-201ENST00000330334 TNFSF11O14788 317 aa15.88■□□□□ 0.13
HDDC3-201ENST00000330334 CXCL13O43927 109 aa15.88■□□□□ 0.13
HDDC3-201ENST00000330334 DNAJA2O60884 412 aa15.88■□□□□ 0.13
HDDC3-201ENST00000330334 SCN2BO60939 215 aa15.88■□□□□ 0.13
HDDC3-201ENST00000330334 NTN1O95631 604 aa15.88■□□□□ 0.13
HDDC3-201ENST00000330334 PLGP00747 810 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms