RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 FAM109BQ6ICB4 259 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 ANKRD54Q6NXT1 300 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 TMEM53Q6P2H8 277 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZCCHC12Q6PEW1 402 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 SYCE2Q6PIF2 218 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZNF322Q6U7Q0 402 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 PARM1Q6UWI2 310 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 RD3Q7Z3Z2 195 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 MARCH9Q86YJ5 346 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CPOQ8IVL8 374 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 TRIM48Q8IWZ4 208 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CAMKK1Q8N5S9 505 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZNF655Q8N720 491 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 ARIH2OSQ8N7S6 290 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CDRT4Q8N9R6 151 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 SYT14Q8NB59 555 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ATP6V1C2Q8NEY4 427 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 OR6F1Q8NGZ6 308 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 FANK1Q8TC84 345 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 DNAJA4Q8WW22 397 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZFPM2Q8WW38 1151 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 FGF14Q92915 247 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 RERGQ96A58 199 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 SIPA1Q96FS4 1042 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZNF486Q96H40 463 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 FCRL4Q96PJ5 515 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 NEDD4LQ96PU5 975 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 SECISBP2Q96T21 854 aaKnown RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 OR2B2Q9GZK3 357 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 SLC6A17Q9H1V8 727 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 UBQLN3Q9H347 655 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CERS4Q9HA82 394 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 NEK6Q9HC98 313 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 HINT3Q9NQE9 182 aaKnown RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 DUSP22Q9NRW4 184 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 C14orf105Q9NVL8 296 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ACTR10Q9NZ32 417 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 FBXL21Q9UKT6 434 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 COL4A2P08572 1712 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 C5orf42Q9H799 3197 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 A6NCN8 305 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 FAM86C2PA6NEL3 165 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 HMX3A6NHT5 357 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CCDC85CA6NKD9 419 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 GABRPO00591 440 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 SOCS6O14544 535 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CTSVO60911 334 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 RGS9O75916 674 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 DXOO77932 396 aaKnown RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 SOX30O94993 753 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 RASGRP1O95267 797 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 LALBAP00709 142 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 GSTT2P0CG29 244 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 GSTT2BP0CG30 244 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 LAMP2P13473 410 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 BMP7P18075 431 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CELP19835 753 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 PAICSP22234 425 aaKnown RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 HNRNPA2B1P22626 353 aaKnown RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 SOX18P35713 384 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 DDOSTP39656 456 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 GPR68Q15743 365 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZNF791Q3KP31 576 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 CCDC92Q53HC0 331 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 SLC35F1Q5T1Q4 408 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ATAD3CQ5T2N8 411 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 TRIQKQ629K1 86 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 FCRL6Q6DN72 434 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 NIPAL3Q6P499 406 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 TMEM184AQ6ZMB5 413 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 DGLUCYQ7Z3D6 616 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 OR4N5Q8IXE1 308 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CDK20Q8IZL9 346 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 RDH10Q8IZV5 341 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 VWA5B2Q8N398 1253 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ACBD7Q8N6N7 88 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 COX18Q8N8Q8 333 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZFP41Q8N8Y5 198 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 BBS1Q8NFJ9 593 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 NEIL3Q8TAT5 605 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 SPRYD4Q8WW59 207 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 ACOT12Q8WYK0 555 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 TSACCQ96A04 125 aaPredicted RBP7.5□□□□□ -1.21
GPC3-204ENST00000631057 TP53INP1Q96A56 240 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 HS6ST2Q96MM7 605 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 DEPDC7Q96QD5 511 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 SNX18Q96RF0 628 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 CD180Q99467 661 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZFYVE21Q9BQ24 234 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZNF559Q9BR84 538 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ZNF649Q9BS31 505 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 TMED9Q9BVK6 235 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 KCNN2Q9H2S1 579 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 OR52D1Q9H346 318 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 TBC1D17Q9HA65 648 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 ADAP2Q9NPF8 381 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 POLE3Q9NRF9 147 aa7.5□□□□□ -1.21
GPC3-204ENST00000631057 INPP5EQ9NRR6 644 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms