RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 BRIX1Q8TDN6 353 aaKnown RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 DNAJA4Q8WW22 397 aaPredicted RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 TMEM239Q8WW34 195 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 EDAQ92838 391 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 NAT6Q93015 286 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 PLEKHA8Q96JA3 519 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 SH3GL3Q99963 347 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 DCUN1D5Q9BTE7 237 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 CNPPD1Q9BV87 410 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 NAA50Q9GZZ1 169 aaKnown RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 FN3KQ9H479 309 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 LIN28AQ9H9Z2 209 aaKnown RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 LANCL2Q9NS86 450 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 GPR83Q9NYM4 423 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 H2AFY2Q9P0M6 372 aaPredicted RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 PILRBQ9UKJ0 227 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 SLC7A7Q9UM01 511 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 DIMT1Q9UNQ2 313 aaKnown RBP9.62□□□□□ -0.87
VPS25-203ENST00000589520 OR10H1Q9Y4A9 318 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 TMEM131Q92545 1883 aa9.62□□□□□ -0.87
VPS25-203ENST00000589520 IGKV3D-11A0A0A0MRZ8 115 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 A0A0B4J2E0 115 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 A0A1B0GX12 115 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 A0A1B0GX78 115 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 FRG2CA6NGY1 282 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 UNC119BA6NIH7 251 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 OR6C76A6NM76 312 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 PRR33A8MZF0 331 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 PEX12O00623 359 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 FRS3O43559 492 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 MAN1A2O60476 641 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 CLPXO76031 633 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 SOX14O95416 240 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 IL33O95760 270 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 CYC1P08574 325 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 CT45A8P0DMV1 189 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 CT45A9P0DMV2 189 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 TDGF1P13385 188 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 ZNF182P17025 639 aaPredicted RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 FBLP22087 321 aaKnown RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 ALAS2P22557 587 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 SSTR4P31391 388 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 GRK5P34947 590 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 DUSP3P51452 185 aaPredicted RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 COPZ1P61923 177 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 OCA2Q04671 838 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 SIGLEC14Q08ET2 396 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 FOXD4Q12950 439 aaPredicted RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 C1DQ13901 141 aaKnown RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 SHBQ15464 509 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 ZNF829Q3KNS6 432 aaPredicted RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 CT45A2Q5DJT8 189 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 ARMC4Q5T2S8 1044 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 ACSM5Q6NUN0 579 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 USP43Q70EL4 1123 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 KANSL1Q7Z3B3 1105 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 SLC46A3Q7Z3Q1 461 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 TMEM151BQ8IW70 566 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 BCORP1Q8N888 145 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 OR52L1Q8NGH7 329 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 OR1L3Q8NH93 324 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 C16orf52Q8NHV5 167 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 SAP25Q8TEE9 199 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 S100ZQ8WXG8 99 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 LGALS12Q96DT0 336 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 VMP1Q96GC9 406 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 SENP5Q96HI0 755 aaPredicted RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 FAM46AQ96IP4 442 aaKnown RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 ZC3H10Q96K80 434 aaKnown RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 LRR1Q96L50 414 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 LRFN5Q96NI6 719 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 IL4I1Q96RQ9 567 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 PRSS27Q9BQR3 290 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 YIPF2Q9BWQ6 316 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 MND1Q9BWT6 205 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 TSSK6Q9BXA6 273 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 TGIF2Q9GZN2 237 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 SIAEQ9HAT2 523 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 AMBNQ9NP70 447 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 PALMDQ9NP74 551 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 FGF20Q9NP95 211 aaPredicted RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 ISYNA1Q9NPH2 558 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 EXOSC3Q9NQT5 275 aaKnown RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 CTPS2Q9NRF8 586 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 UBQLN4Q9NRR5 601 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 TBC1D23Q9NUY8 699 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 RPS6KB2Q9UBS0 482 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 KLHL3Q9UH77 587 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 KCNE5Q9UJ90 142 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 ERVK-19Q9WJR5 959 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 CLCA3PQ9Y6N3 262 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 A3GALT2U3KPV4 340 aa9.61□□□□□ -0.87
VPS25-203ENST00000589520 ZFHX2Q9C0A1 2572 aaPredicted RBP9.61□□□□□ -0.87
VPS25-203ENST00000589520 GOLGA4Q13439 2230 aaKnown RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 CACNA1IQ9P0X4 2223 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 CCDC88CQ9P219 2028 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 TCRBV16S1A1N1A0A5B0 115 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 SERINC4A6NH21 518 aa9.6□□□□□ -0.87
VPS25-203ENST00000589520 KDM4EB2RXH2 506 aaPredicted RBP9.6□□□□□ -0.87
VPS25-203ENST00000589520 TGFBR3LH3BV60 316 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms