RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 TUBAL3A6NHL2 446 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 A6NNC1 897 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 SCDO00767 359 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 SMNDC1O75940 238 aaKnown RBP eCLIP16.21■□□□□ 0.191e-8■■■■■ 28.3
SRSF1-208ENST00000584773 C1QCP02747 245 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 HPGDP15428 266 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 IL11P20809 199 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 DNAJA1P31689 397 aaKnown RBP16.21■□□□□ 0.19
SRSF1-208ENST00000584773 CPOXP36551 454 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 C21orf58P58505 322 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 PHC1P78364 1004 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 MAD2L1Q13257 205 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-208ENST00000584773 PON3Q15166 354 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 TESK1Q15569 626 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 PLPPR5Q32ZL2 321 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 LSM12Q3MHD2 195 aaKnown RBP16.21■□□□□ 0.19
SRSF1-208ENST00000584773 CAMKMTQ7Z624 323 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 POC1BQ8TC44 478 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 SFXN5Q8TD22 340 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 RNF145Q96MT1 663 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 CLEC4MQ9H2X3 399 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-208ENST00000584773 NEUROD4Q9HD90 331 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 RASSF1Q9NS23 344 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 MED17Q9NVC6 651 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 HAO1Q9UJM8 370 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 FOXD3Q9UJU5 478 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-208ENST00000584773 FAF1Q9UNN5 650 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-208ENST00000584773 ABCA4P78363 2273 aa16.21■□□□□ 0.19
SRSF1-208ENST00000584773 TMEM120BA0PK00 339 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 FAM221AA4D161 298 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 C9JVG2 144 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 EIF1AYO14602 144 aaKnown RBP16.2■□□□□ 0.18
SRSF1-208ENST00000584773 AQP8O94778 261 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 SLC6A8P48029 635 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 NME5P56597 212 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 ZNF117Q03924 483 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 GLYR1Q49A26 553 aaPredicted RBP16.2■□□□□ 0.18
SRSF1-208ENST00000584773 PPP4R4Q6NUP7 873 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 CBLN3Q6UW01 205 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 BTLAQ7Z6A9 289 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 METTL25Q8N6Q8 603 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 PHOSPHO1Q8TCT1 267 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 FAM222BQ8WU58 562 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 ZNF524Q96C55 264 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 STARD4Q96DR4 205 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 ARSGQ96EG1 525 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 DPY30Q9C005 99 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 OPN3Q9H1Y3 402 aaPredicted RBP16.2■□□□□ 0.18
SRSF1-208ENST00000584773 PACSIN3Q9UKS6 424 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.2■□□□□ 0.18
SRSF1-208ENST00000584773 AP4B1Q9Y6B7 739 aa16.2■□□□□ 0.18
SRSF1-208ENST00000584773 CENPVL1A0A0U1RR11 272 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 RNF103-CHMP3A0A140T963 221 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 A0A1W2PQD3 144 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 A8MXE2 369 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 ANKRD28O15084 1053 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 TNFRSF21O75509 655 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 ALDOCP09972 364 aaKnown RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 HIVEP1P15822 2718 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 ATP6V1C1P21283 382 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 PSMA4P25789 261 aaKnown RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 SHC1P29353 583 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 KIR2DL2P43627 348 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 SMU1Q2TAY7 513 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 HHATQ5VTY9 493 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 HEATR5AQ86XA9 2040 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 CDC20BQ86Y33 519 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 KIF18BQ86Y91 864 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 ZNF614Q8N883 585 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 OR4A15Q8NGL6 344 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 GOT1L1Q8NHS2 421 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 B4GALNT2Q8NHY0 566 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 TEX37Q96LM6 180 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 ACBD3Q9H3P7 528 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 MARCOQ9UEW3 520 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 CLEC4AQ9UMR7 237 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 CARD8Q9Y2G2 431 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 SDHDO14521 159 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 SCN2BO60939 215 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 CPSF4O95639 269 aaKnown RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 ZNF17P17021 662 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 LBPP18428 481 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 MATN1P21941 496 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 LCN1P31025 176 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 PEX19P40855 299 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 EIF1AXP47813 144 aaKnown RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 ZNF41P51814 821 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 SORDQ00796 357 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 FAM27E3Q08E93 113 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 FOXF1Q12946 379 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 POU4F3Q15319 338 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 TOMM34Q15785 309 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 CTU2Q2VPK5 515 aaKnown RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 KLHL26Q53HC5 615 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 SPANXN4Q5MJ08 99 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 ZNF474Q6S9Z5 364 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 C6orf120Q7Z4R8 191 aa16.19■□□□□ 0.18
SRSF1-208ENST00000584773 LSRQ86X29 649 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 GTPBP8Q8N3Z3 284 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-208ENST00000584773 NATD1Q8N6N6 113 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms