RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 SPAG16Q8N0X2 631 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ZNF527Q8NB42 609 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 CASTOR1Q8WTX7 329 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 THAP4Q8WY91 577 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 TRIM43Q96BQ3 446 aaPredicted RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 SLC46A2Q9BY10 475 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 PPA2Q9H2U2 334 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 TREM1Q9NP99 234 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 HPF1Q9NWY4 346 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 TRAV27A0A087WT01 109 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 A0A0A6YYJ9 748 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 TRAPPC13A5PLN9 417 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 HRO43593 1189 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 NFATC1O95644 943 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 CD2P06729 351 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 FBXO45P0C2W1 286 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 PTPN6P29350 595 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 MMP12P39900 470 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 MAP3K8P41279 467 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 PTH2RP49190 550 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 HYAL2Q12891 473 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 RAB33AQ14088 237 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 OPCMLQ14982 345 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 CLPPQ16740 277 aaPredicted RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 FAM27D1Q5T7N8 215 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 FAM180AQ6UWF9 173 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ESPNLQ6ZVH7 1005 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 PARS2Q7L3T8 475 aaKnown RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 GRASPQ7Z6J2 395 aaPredicted RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 ADGRF3Q8IZF5 1079 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ARMC10Q8N2F6 343 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 ACOT4Q8N9L9 421 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 INO80EQ8NBZ0 244 aaPredicted RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 CCDC107Q8WV48 283 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 SMPDL3BQ92485 455 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 RAB11FIP5Q9BXF6 653 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 GLIPR2Q9H4G4 154 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
USB1-212ENST00000566082 ATP13A2Q9NQ11 1180 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 SCP2D1Q9UJQ7 156 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 POLHQ9Y253 713 aa9.87□□□□□ -0.83
USB1-212ENST00000566082 HEPACAM2A8MVW5 462 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 SLC2A10O95528 541 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 GNALP38405 381 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 DNASE1L1P49184 302 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 VEGFCP49767 419 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 TLE2Q04725 743 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 DBPQ10586 325 aaPredicted RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 MPP7Q5T2T1 576 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 KIAA1324Q6UXG2 1013 aaKnown RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 QSOX2Q6ZRP7 698 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 SYT9Q86SS6 491 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 RDH10Q8IZV5 341 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 SDR9C7Q8NEX9 313 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 OR56B4Q8NH76 319 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 NSMAFQ92636 917 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 GHSRQ92847 366 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 TM4SF18Q96CE8 201 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 OR7D2Q96RA2 312 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 DCLRE1CQ96SD1 692 aaKnown RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 DDOQ99489 341 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 DHRS9Q9BPW9 319 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 SGIP1Q9BQI5 828 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 ELL3Q9HB65 397 aaPredicted RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 A4GALTQ9NPC4 353 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 V9GYH0 126 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 KCNE1BA0A087WTH5 132 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 C13orf42A0A1B0GVH6 325 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 MEIS3P1A6NDR6 274 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 OR52A4PA6NMU1 304 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 DISC1C4P0D8 188 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 MCIDASD6RGH6 385 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 PRAMEF4O60810 478 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 ADAMTS4O75173 837 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 SYPP08247 313 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 PRPH2P23942 346 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 RBMS1P29558 406 aaKnown RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 GDNFP39905 211 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 CLDN2P57739 230 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 PRAMEF9Q5VWM5 478 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 LCTLQ6UWM7 567 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 APOOLQ6UXV4 268 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 MEPCEQ7L2J0 689 aaKnown RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 ZNF227Q86WZ6 799 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 NKAIN4Q8IVV8 208 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 TCTE3Q8IZS6 198 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 LRRC25Q8N386 305 aaPredicted RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 JAGN1Q8N5M9 183 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 GATSQ8NAP1 163 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 ZDHHC1Q8WTX9 485 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 TMEM239Q8WW34 195 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 CDS1Q92903 461 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 TSNAXQ99598 290 aaKnown RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 ACTRT3Q9BYD9 372 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 MTHFD2LQ9H903 347 aaPredicted RBP9.86□□□□□ -0.83
USB1-212ENST00000566082 SLAMF7Q9NQ25 335 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 EVA1BQ9NVM1 165 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 RABL2BQ9UNT1 228 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 HS3ST2Q9Y278 367 aa9.86□□□□□ -0.83
USB1-212ENST00000566082 MRPS33Q9Y291 106 aaKnown RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms