RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 PRSS48Q7RTY5 328 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 RANBP3LQ86VV4 465 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 IPCEF1Q8WWN9 437 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 GGHQ92820 318 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 PMM1Q92871 262 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 CLIP3Q96DZ5 547 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 SENP5Q96HI0 755 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF578Q96N58 590 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 DPYSL5Q9BPU6 564 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ITPAQ9BY32 194 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 PLA2G12AQ9BZM1 189 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ANKRD19PQ9H560 264 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 GPR83Q9NYM4 423 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 POU2F3Q9UKI9 436 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 A0A1B0GX78 115 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 CLCA1A8K7I4 914 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 PIP5K1CO60331 668 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 CNOT3O75175 753 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 SOX30O94993 753 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 FBLP22087 321 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 C21orf33P30042 268 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 IFNA8P32881 189 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 GALNSP34059 522 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 OMPP47874 163 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 PCYT1AP49585 367 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 RHAGQ02094 409 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ALDH6A1Q02252 535 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 TUBA3CQ13748 450 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 DECR1Q16698 335 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 C12orf73Q69YU5 71 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 WDR88Q6ZMY6 472 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 CCDC81Q6ZN84 652 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 PRSS58Q8IYP2 241 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 TMCO5AQ8N6Q1 288 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF614Q8N883 585 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 FAM181AQ8N9Y4 354 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF420Q8TAQ5 688 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ACOT11Q8WXI4 607 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 CNOT9Q92600 299 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ZC3H10Q96K80 434 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 PHOX2BQ99453 314 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 DOK1Q99704 481 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 COPS4Q9BT78 406 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 TPK1Q9H3S4 243 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 DSN1Q9H410 356 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 EGLN3Q9H6Z9 239 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 Q9N2J8 555 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 CCNB1IP1Q9NPC3 277 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 FKBP14Q9NWM8 211 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 MMACHCQ9Y4U1 282 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 A0A0C4DFX4 3053 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF99A8MXY4 864 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF701M0R085 212 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 TOX3O15405 576 aaPredicted RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 FOXL2P58012 376 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 TEKQ02763 1124 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 SQSTM1Q13501 440 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 DNASE1L3Q13609 305 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 SF3B4Q15427 424 aaKnown RBP eCLIP8.7□□□□□ -1.022e-14■■■■■ 73.1
LINC00838-201ENST00000562956 OR1Q1Q15612 314 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 QSOX2Q6ZRP7 698 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 MED25Q71SY5 747 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 NRMQ8IXM6 262 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 BCORP1Q8N888 145 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 SCAIQ8N9R8 606 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 GNPDA2Q8TDQ7 276 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 LMF1Q96S06 567 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 PRSS27Q9BQR3 290 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 PELOQ9BRX2 385 aaKnown RBP8.7□□□□□ -1.02
LINC00838-201ENST00000562956 SYNDIG1Q9H7V2 258 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 ACOT13Q9NPJ3 140 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 CBLCQ9ULV8 474 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 OR10H1Q9Y4A9 318 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 NOX1Q9Y5S8 564 aa8.7□□□□□ -1.02
LINC00838-201ENST00000562956 TECTAO75443 2155 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 IGHV5-10-1A0A0J9YXX1 117 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 ADAM11O75078 769 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 ZNF12P17014 697 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 DRD5P21918 477 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 HOXD11P31277 338 aaPredicted RBP8.69□□□□□ -1.02
LINC00838-201ENST00000562956 IFNGR2P38484 337 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 SLC37A1P57057 533 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 ARHGAP40Q5TG30 622 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 RRM2BQ7LG56 351 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 BCDIN3DQ7Z5W3 292 aaKnown RBP8.69□□□□□ -1.02
LINC00838-201ENST00000562956 TMEM151BQ8IW70 566 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 ALDH16A1Q8IZ83 802 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 B3GNT7Q8NFL0 401 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 PIGXQ8TBF5 258 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 FKBP10Q96AY3 582 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 POLE4Q9NR33 117 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 TNRC6BQ9UPQ9 1833 aaKnown RBP8.69□□□□□ -1.02
LINC00838-201ENST00000562956 TRAPPC13A5PLN9 417 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 MPZL2O60487 215 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 MRPS14O60783 128 aaKnown RBP8.69□□□□□ -1.02
LINC00838-201ENST00000562956 ENTPD6O75354 484 aa8.69□□□□□ -1.02
LINC00838-201ENST00000562956 LYPD3O95274 346 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms