RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FAM230AA0A1W2PPH8 454 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 AKAIN1P0CW23 69 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 SHC2P98077 582 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 KEAP1Q14145 624 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 SF3A2Q15428 464 aaKnown RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 SERINC5Q86VE9 423 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 KLHDC8AQ8IYD2 350 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 HAVCR2Q8TDQ0 301 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 ZNF384Q8TF68 577 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 ACOT11Q8WXI4 607 aaPredicted RBP9.4□□□□□ -0.9
COL4A6-208ENST00000538570 BRI3BPQ8WY22 251 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 DIO2Q92813 273 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 MAL2Q969L2 176 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 CWH43Q9H720 699 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 KLHL42Q9P2K6 505 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 DNAJC15Q9Y5T4 150 aa9.4□□□□□ -0.9
COL4A6-208ENST00000538570 A0A1W2PQU0 124 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 C6P13671 934 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF43P17038 809 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 MAOBP27338 520 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 HOXD13P35453 343 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 GDPGP1Q6ZNW5 385 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 RNF128Q8TEB7 428 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 TOMM40LQ969M1 308 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 TEPSINQ96N21 525 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 MYEF2Q9P2K5 600 aaKnown RBP9.4□□□□□ -0.91
COL4A6-208ENST00000538570 GJD2Q9UKL4 321 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 MON2Q7Z3U7 1717 aa9.4□□□□□ -0.91
COL4A6-208ENST00000538570 IGLON5A6NGN9 336 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ARGFXA6NJG6 315 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 NDUFB2O95178 105 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 F2P00734 622 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SERPINA5P05154 406 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 CCL5P13501 91 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 GATMP50440 423 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 LIMK1P53667 647 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SH3BP2P78314 561 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 RGNQ15493 299 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF704Q6ZNC4 412 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 LARP4Q71RC2 724 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 OR5D16Q8NGK9 328 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 IGSF21Q96ID5 467 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 RADILQ96JH8 1075 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 PELI2Q9HAT8 420 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 RDH14Q9HBH5 336 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 TUBAL3A6NHL2 446 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 FAM227AF5H4B4 570 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 CD63P08962 238 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 CRABP1P29762 137 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 PCP4P48539 62 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 GK3PQ14409 553 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 EIF4HQ15056 248 aaKnown RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 RPS26P11Q5JNZ5 115 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 IL22RA1Q8N6P7 574 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 OR1J4Q8NGS1 313 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 FRS2Q8WU20 508 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SLC7A7Q9UM01 511 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 TP53TG5Q9Y2B4 290 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 PCDHGA5Q9Y5G8 931 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SNNO75324 88 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SLC10A2Q12908 348 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 C1orf61Q13536 156 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ZC3H3Q8IXZ2 948 aaKnown RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SLC2A12Q8TD20 617 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 HPSE2Q8WWQ2 592 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 DHRS9Q9BPW9 319 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ST6GALNAC5Q9BVH7 336 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 VRTNQ9H8Y1 702 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 B3GNT2Q9NY97 397 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 IL20RAQ9UHF4 553 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 PCDHGA7Q9Y5G6 932 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ANKUB1A6NFN9 424 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ALX3O95076 343 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 APOA2P02652 100 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SERPINA7P05543 415 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 PNMTP11086 282 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 TPT1P13693 172 aaKnown RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SGSHP51688 502 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SIM1P81133 766 aaPredicted RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 NLGN4XQ8N0W4 816 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF417Q8TAU3 575 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 RBPMSQ93062 196 aaKnown RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 CDH20Q9HBT6 801 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 PLEKHJ1Q9NW61 149 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 APOBEC3BQ9UH17 382 aaKnown RBP9.39□□□□□ -0.91
COL4A6-208ENST00000538570 UGT2A1Q9Y4X1 527 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 C17orf113A0A1B0GUU1 675 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ACOT7O00154 380 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 NME4O00746 187 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 LAMP1P11279 417 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 TNFRSF1BP20333 461 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 SUOXP51687 545 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 CDK5R2Q13319 367 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 FCRLBQ6BAA4 426 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 NIPAL3Q6P499 406 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 FIGLAQ6QHK4 219 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 CLEC9AQ6UXN8 241 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 USP51Q70EK9 711 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 ZNF561Q8N587 486 aa9.39□□□□□ -0.91
COL4A6-208ENST00000538570 MS4A4EQ96PG1 132 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms