RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NKX6-3A6NJ46 265 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 F8WDY8 70 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 H0YIG0 161 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 KLF11O14901 512 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 OGTO15294 1046 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 LATO43561 262 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 GMNNO75496 209 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 STK17BO94768 372 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 PLEKHA8P1O95397 391 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 OAS1P00973 400 aaKnown RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 IGHV4-38-2P0DP08 117 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 SKILP12757 684 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 GOT1P17174 413 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 RPA1P27694 616 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 AKT2P31751 481 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 NKX2-1P43699 371 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 CDKL1Q00532 357 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 POU3F1Q03052 451 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 SNX1Q13596 522 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 ITGA9Q13797 1035 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 KEAP1Q14145 624 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 GK2Q14410 553 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF235Q14590 738 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 HERC3Q15034 1050 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 XKR6Q5GH73 641 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 IL23RQ5VWK5 629 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 PRAMEF7Q5VXH5 474 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 NKAIN2Q5VXU1 208 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 GALNT17Q6IS24 598 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 SLC27A4Q6P1M0 643 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 ALKAL1Q6UXT8 129 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 C12orf54Q6X4T0 127 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 C9orf47Q6ZRZ4 202 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 Q6ZSR6 202 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 C1orf186Q6ZWK4 172 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 CPEB2Q7Z5Q1 589 aaKnown RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 ISCA2Q86U28 154 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 NFE4Q86UQ8 179 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 VPS36Q86VN1 386 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 PARGQ86W56 976 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 PELI3Q8N2H9 469 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 CIARTQ8N365 385 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF540Q8NDQ6 660 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 DQX1Q8TE96 717 aaKnown RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 PINX1Q96BK5 328 aaKnown RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 RBM41Q96IZ5 413 aaKnown RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF583Q96ND8 569 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 IL17FQ96PD4 163 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 FCRL4Q96PJ5 515 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 CCM2Q9BSQ5 444 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 FICDQ9BVA6 458 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 NUDT9Q9BW91 350 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 TMEM231Q9H6L2 316 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 XPNPEP1Q9NQW7 623 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 GPR83Q9NYM4 423 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 VPS54Q9P1Q0 977 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 APOBEC3BQ9UH17 382 aaKnown RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 CYTH4Q9UIA0 394 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 XPO7Q9UIA9 1087 aaKnown RBP4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 TMED7Q9Y3B3 224 aa4.14□□□□□ -1.75
HMGB1P23-201ENST00000518743 TRBV5-5A0A0J9YX44 114 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 DNAJC9-AS1A6NH13 148 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 E2F3O00716 465 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 CYB561D2O14569 222 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 COCHO43405 550 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SCGB2A1O75556 95 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 IFNB1P01574 187 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 CSF2P04141 144 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 ATP1B1P05026 303 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 KRT8P05787 483 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 HIST1H2AGP0C0S8 130 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 TNNI3P19429 210 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 F8A1P23610 371 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SRD5A2P31213 254 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 ARL2P36404 184 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 MAGEA4P43358 317 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 TNFSF10P50591 281 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 DNA2P51530 1060 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 CCR4P51679 360 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 MTTPP55157 894 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 NME3Q13232 169 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 TPD52L1Q16890 204 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 DEFB113Q30KQ7 82 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 C1orf189Q5VU69 101 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 WSCD1Q658N2 575 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 ZNF425Q6IV72 752 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 ACOT1Q86TX2 421 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SLC47A2Q86VL8 602 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SLC22A18ASQ8N1D0 253 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SMYD1Q8NB12 490 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 FDCSPQ8NFU4 85 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 OR6M1Q8NGM8 313 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 SGMS2Q8NHU3 365 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 THRSPQ92748 146 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 HIST1H2ACQ93077 130 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 GLYATL1Q969I3 302 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 ST6GAL2Q96JF0 529 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 S1PR3Q99500 378 aa4.13□□□□□ -1.75
HMGB1P23-201ENST00000518743 LPAR4Q99677 370 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms